Job Description P42601 Confidence 1.65% Date Thu Jan 5 12:01:46 GMT 2012 Rank 73 Aligned Residues 105 % Identity 19% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																										.																															.	.	.	.
Query SS confidence																	.	.	.	.	.																										.																															.	.	.	.
Query Sequence		D	V	I	F	A	V	D	S	I	P	A	I	F	A	V	.	.	.	.	.	T	T	D	P	F	I	V	L	T	S	N	L	F	A	I	L	G	L	R	A	M	Y	F	L	L	.	A	G	V	A	E	R	F	S	M	L	K	Y	G	L	A	V	I	L	V	F	I	G	I	K	M	L	I	V	D	F	.	.	.	.
Query Conservation																	.	.	.	.	.																										.																															.	.	.	.
Alig confidence																	.	.	.	.	.																										.																															.	.	.	.
Template Conservation
Template Sequence		E	F	A	F	Y	I	C	G	L	I	A	I	L	A	T	L	R	V	I	T	H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I
Template Known Secondary structure																								S																						T	T											T																			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Y	H	I	P	I	A	V	S	L	G	V	V	F	G	I	L	V	M	T	F	I	I	N	A	W	V	N	Y	R	H	D	K	Q	R	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G
Template Known Secondary structure						T	T		S																							T	T	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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