Return to main results Retrieve Phyre Job Id

Job DescriptionP42601
Confidence1.21%DateThu Jan 5 12:01:46 GMT 2012
Rank97Aligned Residues13
% Identity15%Templatec2vi6F_
PDB info PDB header:transcriptionChain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........
Predicted Secondary structure 


Query SS confidence 












Query Sequence  INAWVNYRHDKQR
Query Conservation   
     
     
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Template Conservation 
  





 
 
Template Sequence  VKTWFQNQRMKCK
Template Known Secondary structure  T
G
Template Predicted Secondary structure 
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   45....50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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