 |
Job Description | P45578 | Confidence | 7.03% | Date | Thu Jan 5 12:03:25 GMT 2012 |
Rank | 89 | Aligned Residues | 68 |
% Identity | 19% | Template | c2dgdD_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; |
PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii
|
Resolution | 2.90 Å |
|
 |
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | E | H | L | F | A | G | F | M | R | N | H | L | N | G | N | G | V | E | I | I | D | I | S | P | M | G | C | R | T | G | F | Y | M | S | L | I | G | T | P | D | E | Q | R | V | A | D | A | W | K | A | A | M | E | D | V | L | K | V | Q | D | Q | N | Q | I | P | E | L | N | V | Y | Q | C | G | T | Y | Q | M | H |
Query Conservation |   |
|
|
|
|
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|   | . | . |   |
|   |   |   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . |
|
|
|
|
|   |
|
|   |
|   |   |   |
Template Sequence |   |
E | R | T | L | E | E | V | E | W | W | R | N | K | . |
. |
G | F | . |
. |
E | I | V | G | Y | D | G | L | G | K | I | R | G | I | . |
. |
. |
D | I | S | N | T | P | I | F | T | I | Y | R | L | V | K | R | H | L | N | E | V | L | K | A | . |
. |
. |
. |
. |
. |
. |
D | A | V | Y | I | A | C | T | A | L | S | T | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | . | . | T |
| . | . |  |  |  |  |  |  |  |
|
|
|
| S |  |  | . | . | . |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T | S | . | . | . | . | . | . | . | S |  |  |  |  |
|
| T | T | S |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
| . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
. | . | |
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
  |   |
135 | . |
Predicted Secondary structure |   |
|  |
Query SS confidence |   |
|
|
Query Sequence |   |
S | L |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
E | A |
Template Known Secondary structure |   |
T |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
186 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|