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Job DescriptionP76585
Confidence99.88%DateThu Jan 5 12:24:52 GMT 2012
Rank9Aligned Residues415
% Identity9%Templated1qsaa1
SCOP infoalpha-alpha superhelix Bacterial muramidases Bacterial muramidases
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   496...500.........510.........520.........530.........540.........550.........560.........570.....
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Query Sequence  RCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGL
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Template Conservation     
  
           
  
   
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Template Sequence  RSRYAQIKQAWDNRQMDVVEQMMPGL. . . . . . . . . . . KDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
Template Known Secondary structure  TT
SGGG...........TTSTTTGGG


TT
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   7..10.........20.........30.. .......40.........50.........60.........70.....
 
   576...580.........590.........600.........610.........620.........630.........640.........650.....
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Query Sequence  ARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQ
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Template Conservation        
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Template Sequence  SRFVNELARREDW. RGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKL. . . . . . . . . . . .
Template Known Secondary structure  TT
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S

SSTT
S
SS


T............
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   76...80........ .90.........100.........110.........120.........130.........140..
 
   656...660.........670.........680.........690.........700.........710.........720.........730.....
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Query Sequence  WRGLCQGRDVNALMTAGQLINWGMPTLAAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVA
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Template Sequence  FSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPA. . . . . . . . . . . . . . . . DYQTIASAIISLANNPNTVLTFAR
Template Known Secondary structure  TT
S
TT
T

G................GG
GGG
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   143......150.........160.........170.........180.. .......190.........200......
 
   736...740.........750.........760.........770......... 780.........790.........800.........810.
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Query Sequence  ALESIEECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFAD. . . . GWRGLAIHAWNKQHDYELAARYLDNAYQLAPQ
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Template Conservation           .                 
                        
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Template Sequence  TTGATDFTR. QMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVA. WRLMGNDVTDEQAKWRDDAIMRSQS
Template Known Secondary structure  S


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TT

.TS
STT

T


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   207..210..... ....220.........230.........240.........250......... 260.........270.........280....
 
   812.......820.........830.........840.........850.........860.........870.........
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Query Sequence  DARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPW. . . . . . . . . . . .
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Template Conservation                ..     
           
         
      
    
                 
   
  
Template Sequence  TSLIERRVRMALGT. . GDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGE
Template Known Secondary structure  ..T
S
TTGGGSTT
TS
STT
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   285....290........ .300.........310.........320.........330.........340.........350.........360..
 
   880.........890.........900.........910.........920.........930.........940.........950..
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Query Sequence  . . . . . . . EGGEGKVTSQFILNQLLRAWQHLDARQPQQACELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDET
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Template Conservation                           
  
   
   

       
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Template Sequence  EYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLV. . . . . . . . . . . . KSKSKTEQAQLARYAFNNQWWD
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S



STT
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TT
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   363......370.........380.........390.........400........ .410.........420.........430
 
   953......960......
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Query Sequence  EATRCLRLAATGDR
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Template Conservation   

     
     
Template Sequence  LSVQATIAGKLWDH
Template Known Secondary structure  TT
TT
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   431........440....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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