Job Description P76585 Confidence 98.87% Date Thu Jan 5 12:24:52 GMT 2012 Rank 98 Aligned Residues 251 % Identity 14% Template c3ty1B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:hypothetical aldose 1-epimerase; PDBTitle: crystal structure of a hypothetical aldose 1-epimerase (kpn_04629)2 from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a3 resolution Resolution 1.90 Å

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		59	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure											.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	V	W	L	E	N	D	Y	.	I	K	V	M	I	L	P	E	L	G	G	R	V	H	R	A	W	D	K	V	K	Q	R	D	F	V	Y	H	N	E	V	I	K	P	A	L	V	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	P	W	I	S	G	G	I	E	F	N	W	P	Q	H
Query Conservation											.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																				.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		K	I	L	T	I	H	S	K	D	G	L	T	I	T	L	S	P	T	R	G	X	N	L	L	R	I	E	G	F	.	.	G	S	R	X	G	W	D	S	P	V	K	E	V	V	N	P	A	F	I	N	L	E	S	R	N	G	L	G	W	L	E	G	F	N	E	X	X	V	R	C	G	Y	E	W	T	G	H	P	V
Template Known Secondary structure									T	T	S							G	G	G	T	T								T	.	.	T								S			S				G	G	G			T	T					T	G	G	G	G	T				S							S			S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
											123	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.											.																						.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.											.																						.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	H	R	P	T	T	F	M	P	V	D	.	F	T	L	E	A	H	E	D	G	A	Q	T	V	W	V	G	E	T	E	P	M	.	.	.	.	.	H	G	L	Q	V	M	T	G	F	T	L	R	P	D	R	A	A	L	E	I	A	S	R	V	Y	N	G	N	A	T	P	R	H	F
Query Conservation		.	.	.	.	.	.	.	.	.											.																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.											.																						.	.	.	.	.
Template Conservation
Template Sequence		T	A	D	G	Q	I	Y	T	L	H	G	K	A	G	N	T	P	A	S	L	V	E	V	E	V	A	D	S	A	P	Y	E	I	R	I	R	G	L	V	K	E	S	T	F	K	K	A	D	L	Q	T	L	T	E	L	R	Y	V	P	G	S	N	S	F	S	L	H	D	V	L	T	N	H	A	D	Y	P	H	D	Y
Template Known Secondary structure				T	T					T	T	B	S	G	G	G	S			S								S	S	T	T														T	T	T													T	T		S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		188	.			190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure				.	.								.													.																																																						.	.
Query SS confidence				.	.								.													.																																																						.	.
Query Sequence		L	W	.	.	W	A	N	P	A	V	K	.	G	G	E	G	H	Q	S	V	F	P	P	D	.	V	T	A	V	F	D	H	G	K	R	A	V	S	A	F	P	I	A	T	G	T	Y	Y	K	V	D	Y	S	A	G	V	D	I	S	R	Y	K	N	V	P	V	P	T	S	Y	M	A	E	K	S	Q	Y	D	.	.
Query Conservation				.	.								.													.																																																						.	.
Alig confidence				.	.								.													.																	.	.	.	.	.	.	.							.	.	.	.	.	.	.																		.	.
Template Conservation																																											.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Sequence		Q	I	I	Y	H	S	N	F	G	T	P	I	L	E	E	G	A	R	F	L	A	P	I	S	S	I	S	P	F	N	D	Y	A	K	S	G	L	K	T	W	Q	.	.	.	.	.	.	.	T	Y	Q	G	P	T	.	.	.	.	.	.	.	K	D	F	D	E	X	V	F	N	I	Q	P	L	A	D	E	N	H	Q
Template Known Secondary structure											T	T	T		S	T	T													S	S	G	G	G	G	G	G	S	T	T	T	T	.	.	.	.	.	.	.	B				S		.	.	.	.	.	.	.	T	T														T	T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.								.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
			262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.								.	.	330	.	.
Predicted Secondary structure		.																																																					.															.	.	.	.	.	.	.
Query SS confidence		.																																																					.															.	.	.	.	.	.	.
Query Sequence		.	F	V	G	A	W	C	H	D	E	D	G	G	L	L	H	V	A	N	H	H	I	A	P	G	K	K	Q	W	S	W	G	H	S	E	F	G	Q	A	W	D	K	S	L	T	D	N	N	G	P	Y	I	E	.	L	M	T	G	I	F	A	D	N	Q	P	D	F	T	.	.	.	.	.	.	.	W	L	D	A	Y
Query Conservation		.																																																					.															.	.	.	.	.	.	.
Alig confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.													.															.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	A	A	V	V	N	K	A	G	D	K	G	A	S	I	Q	F	D	T	R	Q	L	P	V	L	T	L	W	.	.	.	.	.	.	.	.	.	.	.	.	K	N	T	D	T	V	K	Q	G	Y	V	T	G	I	E	P	G	T	S	Y	A	Y	P	V	T	I	E	R	K	Q	K	R	V	K	Q	L	Q	P	G
Template Known Secondary structure									S	S	S	S									T	T	T								.	.	.	.	.	.	.	.	.	.	.	.						T	T	T										S	S		S	S								T	T							T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.													320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		333	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	K	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	A	Q	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions