Job Description P76585 Confidence 95.76% Date Thu Jan 5 12:24:52 GMT 2012 Rank 132 Aligned Residues 102 % Identity 13% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	Y	N	R	A	D	F	P	Q	A	V	A	Y	A	T	Q	A	L	K	R	A	H	A	L	N	K	N	P	Q	C	G	Q	A	S	L	I	R	A	S	A	Y	E	R	Q	G	Q	Y	Q	Q	A	E	E	D	F	W	R	A	V	W	S	G	N	S	K	A	G	G	Y	Y	G	L	A	R	L	A	A	R	N
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Sequence		D	L	A	L	E	Y	G	N	L	D	A	A	L	D	E	A	K	K	L	.	.	.	.	.	.	.	.	.	.	.	N	D	S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	F	D	.	.	.	.	.	.	.	.	K	L	S	F	L	Y	L	V	T
Template Known Secondary structure							T	T													.	.	.	.	.	.	.	.	.	.	.																T	T												T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.												.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.									.	.	.	.	710	.	.	.	.
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	F	D	A	G	L	D	F	C	Q	Q	S	L	R	A	C	P	T	N	Q	E	V	L	C	L	H	N	L	L	L	V	L	S	G	R	Q	D	N	A	R	V	Q	R	E	K
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		G	D	V	N	K	L	S	K	M	Q	N	I	A	Q	T	R	E	D	.	.	.	.	.	F	G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E
Template Known Secondary structure		T															T	T		.	.	.	.	.												T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.						.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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