Job Description P76585 Confidence 94.40% Date Thu Jan 5 12:24:52 GMT 2012 Rank 139 Aligned Residues 194 % Identity 13% Template c3mi6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of the alpha-galactosidase from lactobacillus2 brevis, northeast structural genomics consortium target lbr11. Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.															.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	P	W	I	S	G	G	I	E	F	N	W	P	Q	H	H	R	P	T	T	F	M	P	V	D	F	T	L	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	D	G	A	Q	T	V	W	V	G	E	T	E	P	M	H	G	L	Q	V	M	T	G	F	T	L	R	P	D	R	A	A	L	E
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	D	F	R	Q	P	A	F	Q	V	T	Q	A	N	G	S	R	I	T	E	L	T	Y	D	H	Y	Q	L	L	T	G	K	Q	R	L	A	N	L	P	S	T	F	D	D	T	D	D	D	A	Q	T	L	V	V	S	F	N	D	R	I	T	G	L	A	L	D	L	N	Y	S	I	F	P	H	Q	D	V	I	V
Template Known Secondary structure		S	S			S			S						T	T	S																S					S	S	S							S														T	T	T												G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	R	V	Y	N	G	N	A	T	P	R	H	F	L	W	W	A	N	P	A	V	K	G	G	E	G	H	Q	S	V	F	P	P	D	V	T	A	V	F	D	H	G	K	R	A	V	S	A	F	P	I	A	T	G	T	Y	Y	K	V	D	Y	S	A	G	V	D	I	S	R	Y	K	N	V	P	V	P	T	S
Query Conservation
Alig confidence																																			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	A	K	F	T	N	P	S	S	E	K	L	V	L	N	R	A	L	S	S	Q	L	D	L	P	D	A	N	Y	D	L	I	.	.	.	.	Q	F	S	G	T	W	A	R	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	Y	R	H	P	L	R	P	G
Template Known Secondary structure										S	S	S															S								.	.	.	.						T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																																			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.																								.	.	.	.	.	210	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		Y	M	A	E	K	S	Q	Y	D	F	V	G	A	W	C	H	D	E	D	G	G	L	L	H	V	A	N	H	H	I	A	P	G	K	K	Q	W	S	W	G	H	S	E	F	G	Q	A	W	D	K	S	L	T	D	N	N	G	P	Y	I	E	L	M	T	G	I	F	A	D	N	Q	P	D	F	T	W	.	L	D	A
Query Conservation																																																																														.
Alig confidence															.				.																.								.																									.	.	.								.
Template Conservation															.				.																.								.																									.	.	.
Template Sequence		X	Q	S	I	S	S	L	R	X	A	S	S	H	.	Q	Q	N	.	P	F	X	X	L	A	R	P	Q	T	T	D	E	Q	G	.	A	V	F	G	F	N	L	.	V	Y	S	G	N	F	L	D	A	I	E	V	D	Q	Y	S	T	S	R	I	L	T	G	I	.	.	.	N	P	D	E	F	G	W	N	L	A	P
Template Known Secondary structure									S	S	S	S		S	.	S	B		.	S							T	T			S	S	S	B	.								.	S			S	S									T	T	S									.	.	.		S	T	T							T
Template Predicted Secondary structure															.				.																.								.																									.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.
		332	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		288	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions