Job Description P76585 Confidence 32.39% Date Thu Jan 5 12:24:52 GMT 2012 Rank 179 Aligned Residues 131 % Identity 11% Template c3lpzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:get4 (yor164c homolog); PDBTitle: crystal structure of c. therm. get4 Resolution 1.98 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.				510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.						.	.	.
Predicted Secondary structure																	.	.	.																																																							.	.	.	.	.
Query SS confidence																	.	.	.																																																							.	.	.	.	.
Query Sequence		Y	R	C	N	L	A	L	A	M	L	E	Y	N	R	A	.	.	.	D	F	P	Q	A	V	A	Y	A	T	Q	A	L	K	R	A	H	A	L	N	K	N	P	Q	C	G	Q	A	S	L	I	R	A	S	A	Y	E	R	Q	G	Q	Y	Q	Q	A	E	E	D	F	W	R	A	V	W	.	.	.	.	.	S	G	N
Query Conservation																	.	.	.																																																							.	.	.	.	.
Alig confidence									.								.	.	.																																																							.	.	.	.	.
Template Conservation									.
Template Sequence		E	R	I	I	A	R	L	.	Q	R	R	I	A	E	G	Q	P	E	E	Q	Y	E	A	A	Q	E	T	R	L	V	A	A	R	Y	S	K	Q	G	N	W	A	A	A	V	D	I	L	A	S	V	S	Q	T	L	L	R	S	G	Q	G	G	S	G	G	D	L	A	V	L	L	V	D	T	F	R	Q	A	G	Q	R
Template Known Secondary structure									.																													T	T																			T	T																				T
Template Predicted Secondary structure									.
Template SS confidence
		6	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.									.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		S	K	A	G	G	Y	Y	G	L	A	R	L	A	A	R	N	G	N	.	.	.	.	.	.	.	.	F	D	A	G	L	D	F	C	Q	Q	S	L	R	A	C	P	T	N	Q	E	V	L	C	L	H	N	L	L	L	V	L	S	G	R	Q	D	N	A	R	V	Q	R
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	G	A	S	R	G	K	L	L	G	C	L	R	L	F	Q	P	G	E	P	V	R	K	R	F	V	K	E	M	I	D	W	S	K	K	F	G	D	Y	P	A	G	D	P	E	L	H	H	V	V	G	T	L	Y	V	E	E	G	E	F	E	A	A	E	K	H	L
Template Known Secondary structure															T	T	S		T	T																			S	S		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions