Job Description P76585 Confidence 85.19% Date Thu Jan 5 12:24:52 GMT 2012 Rank 149 Aligned Residues 132 % Identity 13% Template c3kaeC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:possible protein of nuclear scaffold; PDBTitle: cdc27 n-terminus Resolution 2.30 Å

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		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	Q	H	L	E	Q	Y	H	H	A	S	R	S	P	F	D	Y	Y	L	R	G	V	A	L	D	P	L	D	Y	R	C	N	L	A	L	A	M	L	E	Y	N	R	A	D	F	P	Q	A	V	A	Y	A	T	Q	A	L	K	R	A	H	A	L	N	K	N	P	Q	C	G	Q	A	S	L	I	R	A	S	A
Query Conservation
Alig confidence																												.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	G	K	I	C	K	S	I	R	Y	R	D	Y	E	T	A	I	F	L	A	A	C	L	L	P	.	.	C	K	P	E	Y	R	M	L	M	S	I	V	L	Y	L	N	G	E	Y	T	R	A	L	F	H	L	H	K	.	.	.	.	.	.	.	.	.	.	.	L	N	T	C	T	S	K	Y	Y	E	S	L	C
Template Known Secondary structure												T	T															.	.			S	T	T											T	T											T	.	.	.	.	.	.	.	.	.	.	.			B
Template Predicted Secondary structure																												.	.																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.												.	60	.	.	.	.	.	.	.	.	.	70	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.																			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	R	Q	G	Q	Y	Q	Q	A	E	E	D	F	W	R	A	V	W	S	G	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	G	Y	Y	G	L	A	R	L	A	A	R	N	G	N	F	D	A	G	L	D	F	C	Q	Q	S	L	R	A	C	P	T	N	Q	E	V	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	K	K	K	D	Y	K	K	A	I	K	S	L	E	S	I	L	E	G	K	V	E	R	D	P	D	V	D	A	R	I	Q	E	M	F	V	D	P	G	D	E	E	F	F	E	S	L	L	G	D	L	C	T	L	S	G	Y	R	E	E	G	I	G	H	Y	V	R	S	F	G	K	S	F	L	F	S	P	V	E
Template Known Secondary structure					T	T														T	T		S	B											T	T	S			T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		607	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		152	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions