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Job DescriptionP76585
Confidence98.96%DateThu Jan 5 12:24:52 GMT 2012
Rank94Aligned Residues250
% Identity15%Templatec3k25B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:slr1438 protein; PDBTitle: crystal structure of slr1438 protein from synechocystis sp. pcc 6803,2 northeast structural genomics consortium target sgr112
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TLSEQKTLKSWQAVWLENDY. . IKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWP. QH. .
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Template Sequence  XYNISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTVQ. . GQPILYFDR. . . . ERFQDPSLSVRGGIPILFPICGNL
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TTTTTTSSST..T
B
B
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   123......130.........140.........150..... ....160.........170.........180
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Query Sequence  . . . . . . . . . . . . . . . . HRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHG. . . . . . LQVMTGFTLRPDRAALEIASRVYNG
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Template Sequence  PQDQFNHAGKSYRLKQHGFARDLPWEVIGQQTQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQGHS. . LRIEQRIANL
Template Known Secondary structure  GGGSSS


TTBSTTTS


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   75....80.........90.........100.........110.........120.........130.........140.. .......150..
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  NATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQY
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Template Sequence  GDQRXPFSLGFHPYFFCREKLGITLAIPANDYLDQKTGDCHGYDGQL. . . . . . . . . . . . . . . . . NLTSPELDLAFTQISQ
Template Known Secondary structure  SSS





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   153......160.........170.........180.........190......... 200.........210.....
 
   261........270.........280.........290.........300.........310.........320.. .......330......
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Query Sequence  DFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADN. . . . QPDFTWLDAYEEKR
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Template Sequence  PRAHFIDPDRNLKIEVSFS. . . ELYQTLVLW. . . . . . . . . . . . . TVAGKDYLCLEPWSGPRNALNSGEQLAWVEPYSSRS
Template Known Secondary structure  STTTT
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   216...220.........230.... .....240... ......250.........260.........270.........
 
   337.
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Query Sequence  FE
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Template Sequence  AW
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   280.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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