Job Description P76585 Confidence 40.72% Date Thu Jan 5 12:24:52 GMT 2012 Rank 161 Aligned Residues 112 % Identity 13% Template c3jq1A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:susd superfamily protein; PDBTitle: crystal structure of susd superfamily protein (yp_001297730.1) from2 bacteroides vulgatus atcc 8482 at 1.55 a resolution Resolution 1.55 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	L	D	Y	R	C	N	L	A	L	A	M	L	E	Y	N	R	A	D	F	P	Q	A	V	A	Y	A	T	Q	A	L	K	R	A	H	A	L	N	K	N	P	Q	C	G	Q	A	S	L	I	R	A	S	A	Y	E	R	Q	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	T	N	S	L	T	Q	G	X	F	Y	Q	F	Y	N	A	L	Y	R	T	N	S	I	X	Q	K	L	E	E	K	K	E	Q	F	S	T	D	F	Q	N	S	V	K	G	E	C	L	F	I	R	G	F	Y	L	F	Q	L	A	K	E	F	K	D	A	P	L	R	L	T	A	S	Q	S	P	S	T	F	P	L
Template Known Secondary structure			T	T																													G	G	G	S																												S	S									S	S				S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
										551	.	.	.	.	.	.	.	.	560	.	.	.	.									.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	Q	Q	A	E	E	D	F	W	R	A	V	W	S	.	.	.	.	.	.	.	.	G	N	S	K	A	G	G	Y	Y	G	L	A	R	L	A	A	R	N	G	N	F	D	A	G	L	D	F	C	Q	Q	S	L	R	A	C	P	T	N
Query Conservation		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	S	S	Q	A	D	I	W	A	Q	A	K	E	D	L	K	T	A	A	S	L	L	P	I	T	N	K	I	G	K	P	T	Q	G	A	A	Y	A	A	L	G	K	I	Y	V	Y	E	E	N	W	Q	E	A	I	N	V	L	E	P	L	T	Q	N	P	Y	T	Y
Template Known Secondary structure																								S		S	S		S	T	T	S																	T	T										G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions