Job Description P76585 Confidence 23.95% Date Thu Jan 5 12:24:52 GMT 2012 Rank 193 Aligned Residues 57 % Identity 25% Template c3iz6D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		Y	P	Y	G	V	T	D	T	L	S	E	Q	K	T	L	K	S	W	Q	A	V	W	L	E	N	D	Y	I	K	V	M	I	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	R	V	H	R	.	A	W	D	K	V	K	Q	R	D	F	V	Y	H	N	E	V	I	K
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.				.	.	.
Template Conservation																																																																.	.	.
Template Sequence		Y	P	A	G	F	M	D	V	I	S	I	P	K	T	G	E	N	Y	R	L	L	Y	D	T	K	G	R	F	R	L	Q	S	V	K	D	E	D	A	K	F	K	L	C	K	V	R	S	V	Q	F	G	Q	K	G	I	P	Y	L	N	T	Y	D	.	.	.	G	R	T	I	R	Y	P	D	P	I	I	K
Template Known Secondary structure						T	T							S	S										T	T	S													T													S	S	S							T	T	.	.	.	S				B	S		S	S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions