Job Description P76585 Confidence 98.13% Date Thu Jan 5 12:24:52 GMT 2012 Rank 120 Aligned Residues 273 % Identity 15% Template c3imhB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:galactose-1-epimerase; PDBTitle: crystal structure of galactose 1-epimerase from lactobacillus2 acidophilus ncfm Resolution 1.76 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.										.	.	.	.
Predicted Secondary structure																		.																											.	.													.	.	.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																		.																											.	.													.	.	.	.							.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	T	L	K	S	W	Q	A	V	W	L	E	N	D	Y	.	I	K	V	M	I	L	P	E	L	G	G	R	V	H	R	A	W	D	K	V	K	Q	R	D	F	V	.	.	Y	H	N	E	V	I	K	P	A	L	V	G	.	.	.	.	L	L	G	P	W	I	.	.	.	.	.	.	.	.	.	S	G	G	I
Query Conservation																		.																											.	.													.	.	.	.							.	.	.	.	.	.	.	.	.
Alig confidence																		.								.												.	.						.	.													.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation																										.												.	.
Template Sequence		R	K	D	N	K	D	L	C	E	I	T	L	E	N	D	A	G	M	A	V	K	V	L	N	.	Y	G	A	T	L	E	K	V	L	L	D	.	.	G	E	N	M	I	L	S	L	N	S	P	E	D	Y	S	K	E	R	N	F	L	G	G	T	V	G	R	I	A	G	R	V	R	A	G	Q	W	K	H	G	N	E
Template Known Secondary structure				T	T											S	S	S							T	.	B	T	T								T	.	.	T				B				S	S	G	G	G	G	G	T	S				T	T					S	B		S			G	G	G					T	T
Template Predicted Secondary structure																										.												.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		116	.	.	.	120	.	.							.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure									.	.	.	.	.	.					.	.																										.	.	.	.	.
Query SS confidence									.	.	.	.	.	.					.	.																										.	.	.	.	.
Query Sequence		E	F	N	W	P	Q	H	.	.	.	.	.	.	H	R	P	T	.	.	T	F	M	P	V	D	F	T	L	E	A	H	E	D	G	A	Q	T	V	W	V	G	E	T	E	.	.	.	.	.	P	M	H	G	L	Q	V	M	T	G	F	T	L	R	P	D	R	A	A	L	E	I	A	S	R	V	Y	N	G	N	A
Query Conservation									.	.	.	.	.	.					.	.																										.	.	.	.	.
Alig confidence									.	.	.	.	.	.					.	.																										.	.	.	.	.																		.
Template Conservation																																																																				.
Template Sequence		I	H	Q	L	P	L	N	D	G	D	N	H	I	H	G	G	I	G	T	D	M	H	V	W	D	F	R	P	S	C	D	S	E	H	A	R	V	D	L	T	L	F	D	P	D	G	N	N	D	Y	P	G	N	L	K	L	H	A	R	Y	E	L	D	N	E	N	.	N	L	H	Y	L	L	E	A	V	S	D	K	L
Template Known Secondary structure									B	T	T	B			T	T	S	S		G	G	G	S	B									S	S												T	T	G	G	G			S												T	T	S	.											S	S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.
		183	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.
Predicted Secondary structure					.	.	.	.	.																																																																.	.	.	.	.	.
Query SS confidence					.	.	.	.	.																																																																.	.	.	.	.	.
Query Sequence		T	P	R	.	.	.	.	.	H	F	L	W	W	A	N	P	A	V	K	G	G	E	G	H	Q	S	V	F	P	P	D	V	T	A	V	F	D	H	G	K	R	A	V	S	A	F	P	I	A	T	G	T	Y	Y	K	V	D	Y	S	A	G	V	D	I	S	R	Y	K	N	V	P	.	.	.	.	.	.	V	P	T
Query Conservation					.	.	.	.	.																																																																.	.	.	.	.	.
Alig confidence					.	.	.	.	.								.	.	.	.																																																					.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		T	I	F	N	P	V	N	H	T	Y	F	N	L	G	E	.	.	.	.	R	A	E	D	L	N	L	Q	M	N	A	D	Y	Y	L	P	V	D	E	A	G	L	P	D	R	G	M	A	E	V	A	G	T	A	F	D	F	R	K	T	K	R	I	G	D	A	L	N	S	D	D	S	Q	I	K	L	R	N	G	L	D
Template Known Secondary structure					B									T	T	S	.	.	.	.		G	G	G													B		T	T	S	S	B	S	S						T	T	S	T	T			S	S									T	S									T	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	M	A	E	K	S	Q	Y	D	F	V	G	A	W	C	H	D	E	D	G	G	L	L	H	V	A	N	H	H	I	A	P	G	K	K	Q	W	S	W	G	H	S	E	F	G	Q	A	W	D	K	S	L	T	D	N	N	G	P	Y	I	E	L	M	T	G	I	F	A	D	N	Q	P	D	F	T	W	L	D	A
Query Conservation
Alig confidence												.	.																	.	.	.									.
Template Conservation												.	.																	.	.	.									.
Template Sequence		H	P	F	I	L	N	G	N	N	P	.	.	A	A	L	L	S	S	N	K	H	R	L	I	V	K	T	N	.	.	.	A	P	A	L	V	L	Y	A	.	G	N	H	F	N	H	T	G	I	V	N	N	I	G	Q	Y	D	G	I	T	F	E	A	Q	C	P	P	A	E	G	N	D	L	G	Q	I	T	L	L	P
Template Known Secondary structure								S		S		.	.	S						S	S								S	.	.	.	S	S							.		T	T			S		G	G	G	T	T			T	T	S								S				S	S	S	B		G	G	G				T
Template Predicted Secondary structure												.	.																	.	.	.									.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		332	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E	K	R	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	K	F	K	R	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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