Job Description P76585 Confidence 98.28% Date Thu Jan 5 12:24:52 GMT 2012 Rank 113 Aligned Residues 212 % Identity 10% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		742	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.		.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		E	C	W	F	A	R	H	L	L	A	C	F	Y	Y	N	K	R	S	Y	N	K	A	I	A	F	W	Q	R	C	V	E	M	.	S	P	E	F	A	D	G	W	R	G	L	A	I	H	A	W	N	K	Q	H	D	Y	E	L	A	A	R	Y	L	D	N	A	Y	Q	L	A	P	Q	D	A	R	L	L	F	E	R	D
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		G	Y	P	E	A	G	L	A	Q	V	L	L	Y	R	T	Q	G	T	Y	D	Q	H	L	D	D	V	E	R	I	C	K	A	A	L	N	T	T	D	I	C	Y	V	E	L	A	T	V	Y	Q	K	Q	P	E	Q	Q	A	E	L	L	K	Q	M	E	A	G	V	S	R	G	T	V	T	A	Q	R	V	D	S	V	A
Template Known Secondary structure		T		T	T													S		T	T	T													T	T	T		T	T													G	G	G															T		S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.				.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		L	L	D	K	L	S	G	A	T	P	E	K	R	L	A	R	L	E	N	N	L	E	I	A	L	K	R	D	D	M	T	A	E	L	L	N	L	W	H	L	T	G	Q	A	.	.	.	D	K	A	A	D	I	L	A	T	R	K	F	H	P	W	E	G	G	E	G	K	V	T	S	Q	F	I	L	N	Q	L	L	R
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	G	D	A	T	L	G	T	P	D	E	K	T	A	Q	A	L	L	E	K	I	A	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	.	.	.	.	.	.	.	.	.	.	.	G	R	A	A	D	Q	P	R	A	E	L	L	L
Template Known Secondary structure					T		T	T	S	S	S														T	T	T	S	T														T	T	S													.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.												.	.	.	280	.	.	.	.	.	.	.	.	.
		898	.	900	.	.	.	.					.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.					.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																												.	.	.	.
Query SS confidence									.	.	.	.																																												.	.	.	.
Query Sequence		A	W	Q	H	L	D	A	.	.	.	.	R	Q	P	Q	Q	A	C	E	L	L	H	A	A	L	H	Y	P	E	N	L	S	E	G	R	L	P	G	Q	T	D	N	D	I	W	F	W	Q	A	I	C	A	N	A	.	.	.	.	Q	G	D	E	T	E	A	T	R	C	L	R	L	A	A	T	G	D	R	T	I	N
Query Conservation									.	.	.	.																																												.	.	.	.
Alig confidence									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Sequence		G	K	L	Y	Y	E	G	K	W	V	P	A	D	A	K	A	A	E	A	H	F	E	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	R	E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R	.	.	.	.	.	.
Template Known Secondary structure									S	S	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T															T	T	T	S	S																.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.														.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	S	Y	Y	N	D	Q	P	V	D	Y	L	F	W	Q	G	M	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	G	Q	N	S	A	D	F	A	I	A	Q	L	F
Template Known Secondary structure		.	.	.	.	.	.	T	T		T	T									T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								351	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions