 |
Job Description | P76585 | Confidence | 21.44% | Date | Thu Jan 5 12:24:52 GMT 2012 |
Rank | 197 | Aligned Residues | 108 |
% Identity | 17% | Template | c3dupB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:mutt/nudix family protein; |
PDBTitle: crystal structure of mutt/nudix family hydrolase from rhodospirillum2 rubrum atcc 11170
|
Resolution | 1.80 Å |
|
 |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | E | L | G | G | R | V | H | R | A | W | D | K | V | K | Q | . |
R | D | F | V | Y | H | N | E | V | I | K | P | A | L | V | G | L | L | G | P | W | I | S | G | G | I | E | F | N | W | P | Q | H | H | R | P | T | T | F | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | D | F | T | L | E | A | H | E | D | G |
Query Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|
|   |   |   | . | . | . | . |   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
V | R | A | Y | G | V | H | L | N | G | Y | V | G | A | G | A | D | L | H | L | W | I | G | R | R | S | P | D | K | S | V | A | P | G | K | L | D | N | X | V | A | G | G | Q | P | . |
. |
. |
. |
A | D | L | S | L | R | Q | N | L | I | K | E | C | A | E | E | A | D | L | P | E | A | L | A | R | Q | A | I | P | V | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|
|  |  |  |  |  |  |  |
| T | T |
| S | S | S | T | T |
|  |  |  | S |  |  |  |  |
|
| . | . | . | . | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
  |   |
142 | . | . | . | . | . | |
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
|  |  |  |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | T | V | W | V | . |
G | E | T | E | P | M | H | G | L | Q | V | M | T | G | F | T | L | R | P | D | R | A | A | L | E | I | A | S | R | V | Y | N | G | N | A | T | P | R | H | F | L | W | W | A |
Query Conservation |   |
  |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |
| . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|
|
|
|   |
|   |
|   |   |
Template Sequence |   |
A | I | T | Y | C | X | E | S | P | A | G | I | K | P | D | T | L | F | L | Y | D | L | A | L | P | E | D | . |
. |
. |
. |
. |
. |
. |
F | R | P | H | N | T | D | G | E | X | A | D | F | X | L | W | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | . | . | . | . | . | . | . |
|
|
|
|
| T | T | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|