Job Description P76585 Confidence 99.81% Date Thu Jan 5 12:24:52 GMT 2012 Rank 20 Aligned Residues 271 % Identity 11% Template c3cvpA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:peroxisome targeting signal 1 receptor pex5; PDBTitle: structure of peroxisomal targeting signal 1 (pts1) binding2 domain of trypanosoma brucei peroxin 5 (tbpex5)complexed3 to pts1 peptide (10-skl) Resolution 2.00 Å

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		529	530	.	.		.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		N	K	N	P	.	Q	C	G	Q	A	S	L	I	R	A	S	A	Y	E	R	Q	G	Q	Y	Q	Q	A	E	E	D	F	W	R	A	V	W	S	G	N	S	K	A	G	G	Y	Y	G	L	A	R	L	A	A	R	N	G	N	F	D	A	G	L	D	F	C	Q	Q	S	L	R	A	C	P	T	N	Q	E	V	L	C
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	N	N	P	Y	M	Y	H	E	N	P	M	E	E	G	L	S	M	L	K	L	A	N	L	A	E	A	A	L	A	F	E	A	V	C	Q	A	A	P	E	R	E	E	A	W	R	S	L	G	L	T	Q	A	E	N	E	K	D	G	L	A	I	I	A	L	N	H	A	R	M	L	D	P	K	D	I	A	V	H	A
Template Known Secondary structure		S	S		G	G	G	G		S												T	T																	T	T															T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	N	L	L	L	V	L	S	G	R	Q	D	N	A	R	V	Q	R	E	K	L	L	R	D	Y	P	L	N	A	T	L	W	W	L	N	W	F	D	G	R	S	E	S	A	L	A	Q	W	R	G	L	C	Q	G	R	D	V	N	A	L	M	T	A	G	Q	L	I	N	W	G	M	P	T	L	A	A	E	M	L
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		A	L	A	V	S	H	T	N	E	H	N	A	N	A	A	L	A	S	L	R	A	W	L	L	S	Q	P	Q	Y	E	Q	F	F	F	A	A	P	N	E	.	.	Y	R	E	C	R	T	L	L	H	A	A	L	E	M	N	P	N	D	A	Q	L	H	A	S	L	G	V	L	Y	N	L	S	N	N	Y	D	S	A	A
Template Known Secondary structure										T	T															T	S	T	T	T					T	T	S				.	.															S	T	T															T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460			.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	D	C	Q	R	T	L	P	L	Y	L	Q	A	S	L	L	P	K	A	E	R	G	E	L	V	A	K	A	I	D	V	F	P	Q	F	V	R	F	P	N	T	L	E	E	V	A	A	L	E	S	I	E	E	C	W	F	A	R	H	L	L	A	C	F	Y	Y	N	K	R	S	Y	N	K	A	I	A	F	W
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		A	N	L	R	.	.	.	.	.	.	.	.	.	R	A	V	E	L	R	P	D	D	A	Q	L	W	N	K	L	G	A	T	L	A	N	G	N	R	P	Q	E	A	L	D	A	Y	N	R	A	L	D	I	N	P	G	Y	V	R	V	M	Y	N	M	A	V	S	Y	S	N	M	S	Q	Y	D	L	A	A	K	Q	L
Template Known Secondary structure						.	.	.	.	.	.	.	.	.							T	T															T	T																	T	T															T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		521	.	.	.										.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
		768	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	C	V	E	M	S	P	E	F	A	D	G	W	R	G	L	A	I	H	A	W	N	K	Q	H	D	Y	E	L	A	A	R	Y	L	D	N	A	Y	Q	L	A	P	Q	D
Query Conservation
Alig confidence												.								.
Template Conservation												.								.
Template Sequence		V	R	A	I	Y	M	Q	V	T	R	.	S	M	W	D	F	F	R	.	M	L	L	N	V	M	N	R	P	D	L	V	E	L	T	Y	A	Q	N	V	E	P	F	A	K	E
Template Known Secondary structure												.								.						T	T								G	G	G	T		S
Template Predicted Secondary structure												.								.
Template SS confidence
		592	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.		.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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