Job Description P76585 Confidence 95.95% Date Thu Jan 5 12:24:52 GMT 2012 Rank 131 Aligned Residues 128 % Identity 14% Template c3bs6B_ PDB info PDB header:membrane protein, protein transport Chain: B: PDB Molecule:inner membrane protein oxaa; PDBTitle: 1.8 angstrom crystal structure of the periplasmic domain of2 the membrane insertase yidc Resolution 1.80 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		Q	A	V	W	L	E	N	D	Y	I	K	V	M	I	L	P	E	L	G	G	R	V	H	R	A	W	D	K	V	.	.	.	.	.	.	K	Q	R	D	F	V	Y	H	N	E	V	I	K	P	A	L	V	G	L	L	G	P	W	I	S	G	G	I	E	F	N	W	P	Q	H	H	R	P	T	T	F	M	P	V	D
Query Conservation																															.	.	.	.	.	.
Alig confidence																		.													.	.	.	.	.	.
Template Conservation																		.
Template Sequence		K	L	I	S	V	K	T	D	V	L	D	L	T	I	N	T	.	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N	V	E	K	D	A
Template Known Secondary structure									S	S							T	.	B	T	T												S	S	T	T			S					S				T	T											S	T	T		T	T	S	G	G	G	S	S			B		B		S		S
Template Predicted Secondary structure																		.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	L	E	A	H	E	D	G	A	Q	T	V	W	V	G	E	T	E	P	M	H	G	L	Q	V	M	T	G	F	T	L	R	P	D	R	A	A	L	E	I	A	S	R	V	Y	N	G	N	A	T	P	R	H	F	L	W
Query Conservation
Alig confidence										.					.
Template Conservation										.					.
Template Sequence		Y	V	L	A	E	G	Q	N	.	E	L	Q	V	.	P	X	T	Y	T	D	A	A	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K	P	L	E	I	S	S
Template Known Secondary structure						T	T		S	.					.							T	T												T	T														S	S	S
Template Predicted Secondary structure										.					.
Template SS confidence
		138	.	140	.	.	.	.	.		.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions