Job Description P76585 Confidence 95.35% Date Thu Jan 5 12:24:52 GMT 2012 Rank 135 Aligned Residues 241 % Identity 17% Template c2xn1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase; PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris Resolution 2.30 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																					.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	V	W	L	E	N	D	Y	I	K	V	M	I	L	P	E	L	G	G	R	V	H	R	A	W	D	K	V	K	Q	R	D	F	V	Y	H	N	E	V	I	K	P	A	L	V	G	L	L	G	P	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	I	E	F	N
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		K	V	F	H	L	H	N	K	Q	I	S	Y	L	L	S	I	E	D	G	G	T	L	S	H	L	Y	F	.	.	.	G	G	A	V	K	N	Y	N	N	Q	L	K	Y	P	R	L	D	R	G	F	S	G	N	L	P	E	S	L	D	R	T	F	S	R	D	S	L	P	K	E	Y	S	S	A	G	E	M	D	F	H
Template Known Secondary structure		T							S	S									G	G	G								.	.	.					S				S	T	T								T	T					T	T				T	T			T	T	T	S		B	S			B	T	T	S	S			S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		119	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	.	.	Q	H	H	R	P	T	T	F	M	P	V	D	F	T	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	E	D	G	A	Q	T	V	W	V	G	E	T	E	P	M	H	G	L	Q	V	M	T	G	F	T	L	R	P	D	R	A	A	L	E	I	A	S	R	V
Query Conservation				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	A	T	I	V	R	N	P	D	G	S	N	A	L	F	L	A	Y	K	S	Y	K	I	E	D	G	K	P	D	L	K	G	L	P	H	S	W	T	K	E	D	D	E	A	Q	T	L	I	V	T	L	E	D	K	V	S	K	L	E	Y	D	L	L	Y	T	I	Y	R	D	R	P	V	I	V	R	S	V	Q	V
Template Known Secondary structure				S						T	T	S																S					T	T	S						S	S	G	G	G											T	T	T	T											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	G	N	A	T	P	R	H	F	L	W	W	A	N	P	A	V	K	G	G	E	G	H	Q	S	V	F	P	P	D	V	T	A	V	F	D	H	G	K	R	A	V	S	A	F	P	I	A	T	G	T	Y	Y	K	V	D	Y	S	A	G	V	D	I	S	R	Y	K	N	V	P	V	P	T	S	Y	M	A	E	K
Query Conservation
Alig confidence																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	H	G	E	E	A	V	Y	L	E	K	V	A	S	M	Q	M	D	Y	V	D	K	D	F	E	V	.	.	.	.	I	T	L	P	G	A	H	A	N	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	Q	R	E	N	I	G	Q	G	I	K	V	F	S
Template Known Secondary structure					S	S	S															S	S						.	.	.	.						B	T	T	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.																								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	Q	Y	D	F	V	G	A	W	C	H	D	E	D	G	G	L	L	H	V	A	N	H	H	I	A	P	G	K	K	Q	W	S	W	G	H	S	E	F	G	Q	A	W	D	K	S	L	T	D	N	N	G	P	Y	I	E	L	M	T	G	I	F	A	D	N	Q	P	D	F	T	W	.	L	D	A	Y	E	E	K	R
Query Conservation																																																																									.
Alig confidence														.														.		.								.																									.	.	.								.
Template Conservation														.														.		.								.																									.	.	.
Template Sequence		S	Y	R	G	T	S	S	H	Q	M	N	P	.	F	M	A	L	V	D	H	D	T	N	E	F	M	.	G	.	E	A	Y	G	F	A	L	.	A	Y	S	G	N	H	K	F	E	V	E	R	D	Q	F	G	Q	I	H	V	N	T	G	I	.	.	.	N	D	Y	N	F	K	W	K	L	N	P	N	E	E	F	Q
Template Known Secondary structure				S	S	S	S		S	S				.							T	T			S	S	S	.	B	.								.			S	S										T	T	S									.	.	.			T	T							T	T
Template Predicted Secondary structure														.														.		.								.																									.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.		.		.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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