Job Description P76585 Confidence 98.42% Date Thu Jan 5 12:24:52 GMT 2012 Rank 109 Aligned Residues 270 % Identity 12% Template c1ygaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:hypothetical 37.9 kda protein in bio3-hxt17 PDBTitle: crystal structure of saccharomyces cerevisiae yn9a protein,2 new york structural genomics consortium Resolution 2.00 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.															.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence															.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		L	K	S	W	Q	A	V	W	L	E	N	D	Y	.	I	K	V	M	I	L	P	E	L	G	G	R	V	H	R	A	W	D	K	V	K	Q	R	D	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	H	N	E	V	I	K	P	.	A	L	V	G	L	L	G	P	W	I	S	G	G	I	E	F	N
Query Conservation															.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence															.								.												.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																							.												.	.
Template Sequence		D	N	K	Y	G	V	I	T	I	G	D	E	K	K	F	Q	A	T	I	A	P	.	L	G	A	T	L	V	D	L	K	V	N	.	.	G	Q	S	V	V	Q	G	Y	S	N	V	Q	D	Y	L	T	D	G	N	M	M	G	A	T	V	G	R	Y	A	N	R	I	A	K	G	V	F	S	L	D	D	G	P	H	K
Template Known Secondary structure				T	T								T	T	T							T	.	B	T	T								T	.	.	T				B				S	S	G	G	G	G	T	T		S	S		T	T					S	B		S			G	G	G					T	T
Template Predicted Secondary structure																							.												.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		119	120	.											.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.								.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.								.	.	.	.
Query Sequence		W	P	Q	.	.	.	.	.	.	.	.	.	.	H	H	R	P	T	T	F	M	P	V	D	F	T	L	E	A	H	E	D	G	A	Q	T	V	W	V	G	.	.	.	.	.	E	T	E	P	M	H	G	.	.	.	.	L	Q	V	M	T	G	F	T	L	R	P	D	R	A	A	L	E	I	A	S	R	V	Y	N
Query Conservation					.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.								.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		L	T	V	N	N	C	G	N	T	N	H	S	S	I	S	S	L	N	L	K	Q	Y	K	A	S	P	V	E	N	P	S	K	G	V	Y	V	V	E	F	K	L	L	D	D	H	T	Q	P	N	P	N	E	F	P	G	D	L	E	V	T	V	K	Y	T	L	N	V	A	E	M	T	L	D	M	E	Y	Q	A	Q	L
Template Known Secondary structure						B	T	T	B			T	T	G	G	G		G	G	G	S	B											T	T												S	S	S	S	S				S	S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																				.	.
Query SS confidence																						.	.	.	.	.	.	.	.																				.	.
Query Sequence		G	N	A	T	P	R	H	F	L	W	W	A	N	P	A	V	K	G	G	E	.	.	.	.	.	.	.	.	G	H	Q	S	V	F	P	P	D	V	T	A	V	F	D	H	G	K	R	.	.	A	V	S	A	F	P	I	A	T	G	T	Y	Y	K	V	D	Y	S	A	G	V	D	I	S	R	Y	K	N	V	P	V
Query Conservation																						.	.	.	.	.	.	.	.																				.	.
Alig confidence																						.	.	.	.	.	.	.	.																				.	.										.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		V	R	G	D	A	T	P	I	N	M	T	N	H	S	Y	F	N	L	N	K	V	K	S	E	K	S	I	R	G	T	E	V	K	V	C	S	N	K	S	L	E	V	T	E	G	A	L	L	P	T	G	K	I	I	E	R	N	I	.	.	.	.	.	.	.	.	.	A	T	F	D	S	T	K	P	T	V	L	H	E
Template Known Secondary structure				S	S					B							B		T	T	T	T	T		T	T			T	T						S									T	T	T											S		.	.	.	.	.	.	.	.	.		B	T	T		S	S						S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.										.	.	.	.	.	.	.	.	230	.	.	.	.
		250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure				.	.	.	.																																																			.											.	.											.
Query SS confidence				.	.	.	.																																																			.											.	.											.
Query Sequence		P	T	.	.	.	.	S	Y	M	A	E	K	S	Q	Y	D	F	V	G	A	W	C	H	D	E	D	G	G	L	L	H	V	A	N	H	H	I	A	P	G	K	K	Q	W	S	W	G	H	S	E	F	G	Q	A	W	D	.	K	S	L	T	D	N	N	G	P	Y	.	.	I	E	L	M	T	G	I	F	A	D	.
Query Conservation				.	.	.	.																																																			.											.	.											.
Alig confidence				.	.	.	.																																																			.											.	.											.
Template Conservation
Template Sequence		D	T	P	V	F	D	C	T	F	I	I	D	A	N	K	D	L	K	T	T	D	S	V	S	V	N	K	L	V	P	V	F	K	A	Y	H	P	E	S	H	I	K	F	E	V	S	T	T	E	P	T	V	H	L	Y	T	G	D	N	L	C	G	K	F	V	P	R	S	G	F	A	V	Q	Q	G	R	Y	V	D	A
Template Known Secondary structure		S											T	T	T	T	T			S	S	B		T	T	T	S											T	T	T									S	S	S								T	T			T	T	S		T	T	S		B						S		S	S	G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
						322	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	N	Q	P	D	F	T	W	L	D	A	Y	E	E	K	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		I	N	R	D	E	W	R	G	C	V	L	L	K	R	G	E	V	Y	T
Template Known Secondary structure		G	G						G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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