Job Description P00887 Confidence 100.00% Date Thu Jan 5 10:56:58 GMT 2012 Rank 3 Aligned Residues 334 % Identity 51% Template d1of8a_ SCOP info TIM beta/alpha-barrel Aldolase Class I DAHP synthetase Resolution 1.5

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	A	R	I	E	S	L	V	T	P	A	E	L	A	L	R	Y	P	V	T	P	G	V	A	T	H	V	T	D	S	R	R	R	I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	I	L	G	Y	D	P	L	A	S	P	A	L	L	Q	V	Q	I	P	A	T	P	T	S	L	E	T	A	K	R	G	R	R	E	A	I	D	I	I	T	G	K	D	D	R	V	L	V	I	V	G	P	C	S	I	H	D	L	E	A	A	Q	E	Y	A	L	R	L	K	K	L	S	D	E	L	K	G	D	L
Template Known Secondary structure																				S																						T	T	S			S								S																							T	T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G	S	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	I	S	W	G	A	I	G	A	R	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	I	M	R	A	Y	L	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	D	V	N	N	T	F	N	I	N	K	G	L	Q	S	A	R	Q	L	F	V	N	L	T	N	I	G	L	P	I	G	S	E	M	L	D	T	I	S	P	Q	Y	L	A	D	L	V	S	F	G	A	I	G	A	R	T	T
Template Known Secondary structure														S	S	S	S				T	T	T		T	T	S	S	S																				T	T	T									S	S	S	T					G	G	G		S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T	R	I	A	V	D	A	I	R	A	A	R	A	S	H	M	F	L	S	P	D	K	N	G	Q	M	T	I	Y	Q	T	S	G	N	P	Y	G	H	I	I	M	R	G	G	K	K	.	P	N	Y	H	A	D	D	I
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		E	S	Q	L	H	R	E	L	A	S	G	L	S	F	P	V	G	F	K	N	G	T	D	G	T	L	N	V	A	V	D	A	C	Q	A	A	A	H	S	H	H	F	M	G	V	T	K	H	G	V	A	A	I	T	T	T	K	G	N	E	H	C	F	V	I	L	R	G	G	K	K	G	T	N	Y	D	A	K	S	V
Template Known Secondary structure		T										T		S	S								T	T	S		S											T	S									T	T	S											S										T	T					S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	C	D	T	L	H	E	F	D	L	P	E	H	L	V	V	D	F	S	H	G	N	C	Q	K	Q	H	R	R	Q	L	E	V	C	E	D	I	C	Q	Q	I	R	N	G	S	T	A	I	A	G	I	M	A	E	S	F	L	R	E	G	T	Q	K	I	V	G	S	Q	P	L	T	Y	G	Q	S	I	T	D
Query Conservation
Alig confidence													.	.																																																						.	.	.	.	.
Template Conservation													.	.																																																						.	.	.	.	.
Template Sequence		A	E	A	K	A	Q	L	P	A	G	S	.	.	N	G	L	M	I	D	Y	S	H	G	N	S	N	K	D	F	R	N	Q	P	K	V	N	D	V	V	C	E	Q	I	A	N	G	E	N	A	I	T	G	V	M	I	E	S	N	I	N	E	G	N	Q	G	I	.	.	.	.	.	L	K	Y	G	V	S	I	T	D
Template Known Secondary structure										T	T		.	.							S	S	G	G	G	G	T	S		G	G	G														T	T			S								B		S	S	S	B	B				.	.	.	.	.			T	T		B	S	S	S
Template Predicted Secondary structure													.	.																																																						.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	L	G	W	E	D	T	E	R	L	V	E	K	L	A	S	A	V	D	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	C	I	G	W	E	T	T	E	D	V	L	R	K	L	A	A	A	V	R	Q	R
Template Known Secondary structure			B	B
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions