Job Description P00887 Confidence 100.00% Date Thu Jan 5 10:56:58 GMT 2012 Rank 10 Aligned Residues 249 % Identity 16% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G	S	Y	R	V	N	H	G
Query Conservation
Alig confidence																																														.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.														.	.	.	.	.	.	.	.	.
Template Sequence		I	N	D	I	T	L	G	N	N	S	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	.	.	Y	I	F	K	A	S	F	D	K	P	R	S	S	.	.	.	.	.	.	.	.	.	I	H	S	Y	R	G	V	G	L	E	E	G
Template Known Secondary structure			T	T					T	T	S																																T			.	.							S			T	T	S		.	.	.	.	.	.	.	.	.	T	T	S				S
Template Predicted Secondary structure																																														.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T	R	I	A	V	D	A	I	R	A
Query Conservation
Alig confidence											.	.	.																																																																		.	.	.
Template Conservation											.	.	.																																																																		.	.	.
Template Sequence		L	K	I	F	E	K	V	K	A	.	.	.	E	F	G	I	P	V	I	T	D	V	H	E	P	H	Q	C	Q	P	V	A	E	V	C	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	.	.	.
Template Known Secondary structure											.	.	.												S												S						G	G	G	T	T																					T	T	S		G	G	G					.	.	.
Template Predicted Secondary structure											.	.	.																																																																		.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	R	A	S	H	M	F	L	S	P	D	K	N	G	Q	M	T	I	Y	Q	T	S	G	N	P	Y	G	H	I	I	M	R	G	G	K	K	.	P	N	Y	H	A	D	D	I	A	A	A	C	D	T	L	H	E	F	D	L	P	E	H	L	V	V	D	F	S	H	G	N	C	Q	K	Q	H	R	R	Q	L	E	V
Query Conservation																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	.	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T														S	S	S						T		.									T	T	T							T	T	T	T		S	S	G	G	G						.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.																																	.
Template SS confidence
																	148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	D	I	C	Q	Q	I	R	N	G	S	T	A	I	A	G	I	M	A	E	S	F	L	R	E	G	T	Q	K	I	V	G	S	Q	P	L	T	Y	G	Q	S	I	T	D	P	C	L	G	W	E	D	T	E	R	L	V	E	K	L	A	S	A	V	D	T	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H	P	D	P	S	A	L	P	L	H	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	F	L	I	R	I	K	A	L	D	D	L	I	K	S	Q
Template Known Secondary structure		.	.	.	.	.	.	.					T	T			S												S			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.																	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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