Job Description P00887 Confidence 50.91% Date Thu Jan 5 10:56:58 GMT 2012 Rank 50 Aligned Residues 134 % Identity 17% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	D	S	R	R	R	I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G
Query Conservation
Alig confidence																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	.	A	G	S	N	S	T	S	E	A	V	E	L	A	K	H	A	E	K	A	G	A	.	.	.	.	D	A	V	L	V	V	T	P	Y	Y	N	R	P	.	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S		B				.				S	S														T	T		.	.	.	.	S									S	S			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.		.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T	R	I
Query Conservation
Alig confidence		.	.	.	.													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation		.	.	.	.													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Sequence		.	.	.	.	R	G	L	Y	T	H	F	S	S	I	A	K	.	.	.	A	I	S	I	P	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	K	N	I	I	G	V	K	D	A	T	.	G	K	I	E	R
Template Known Secondary structure		.	.	.	.													.	.	.			S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S															T	T								S	.			T
Template Predicted Secondary structure		.	.	.	.													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
						117	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.															.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	A	I	R	A	A	R	A	S	H	M	F	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	E	Q	R	E	K	C	G	K	D	F	V	Q	L	S
Template Known Secondary structure											T	T	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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