Job Description P00887 Confidence 21.65% Date Thu Jan 5 10:56:58 GMT 2012 Rank 102 Aligned Residues 148 % Identity 16% Template c3g0sA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 Resolution 1.85 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	D	S	R	R	R	I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G
Query Conservation
Alig confidence																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	E	H	G	D	V	V	M	M	T	L	E	L	A	D	G	R	I	P	V	I	A	G	.	T	G	A	N	A	T	A	E	A	I	S	L	T	Q	R	F	N	D	S	G	I	.	.	.	.	V	G	C	L	T	V	T	P	Y	Y	N	R	P	.	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S						.				S	S										T	T	T	T	S	S		.	.	.	.										S	S			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110		.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		S	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	.	.	.	.	.	.	.	.	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.													.	.	.							.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.													.	.	.
Template Sequence		.	.	.	.	E	G	L	F	Q	H	F	K	A	I	A	E	.	.	.	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R	T	G	C	D	M	L	P	E	T	V	G	R	L	A	E	I	K	N	I	I	A	I	K	E	A	T	G	N	L	T	R	V	H	Q	I	K	E	L	V	S	D	D	F	I	L	L	S
Template Known Secondary structure		.	.	.	.													.	.	.	T		S	S												S													T	S	T	T								S			T	T							T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.													.	.	.
Template SS confidence
						113	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	D	G	N	T	R	I	A	V	D	A	I	R	A	A	R	A	S	H	M	F	L	S	P	D	K	N	G	Q	M	T	I	Y	Q	T	S	G	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	D	A	S	A	L	D	F	M	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	H	G	V	I	S	V	T	A	N
Template Known Secondary structure		S		G	G	G							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							S	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.																	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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