Job Description P00887 Confidence 100.00% Date Thu Jan 5 10:56:58 GMT 2012 Rank 11 Aligned Residues 240 % Identity 22% Template c3fs2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G	S	Y	R	V	N	H	G
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	N	V	T	F	S	N	S	A	P	L	A	L	I	A	G	P	C	Q	M	E	T	R	D	H	A	F	E	M	A	G	R	L	K	E	M	T	D	K	L	.	.	.	.	.	.	.	G	I	G	L	V	Y	K	S	S	F	D	K	A	N	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A
Template Known Secondary structure			T	T					T	T	S									S	B																						.	.	.	.	.	.	.	T								B									.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.													.	.	70
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T	R	I	A	V	D	A	I	R	A
Query Conservation
Alig confidence											.	.	.																																																																		.	.	.
Template Conservation											.	.	.																																																																		.	.	.
Template Sequence		L	E	V	F	S	D	L	K	K	.	.	.	E	Y	G	F	P	V	L	T	D	I	H	T	E	E	Q	C	A	A	V	A	P	V	V	D	V	L	Q	I	P	A	F	L	C	R	Q	T	D	L	L	I	A	A	A	R	T	G	R	V	V	N	V	K	K	G	Q	F	L	A	P	W	D	M	K	N	V	.	.	.
Template Known Secondary structure											.	.	.												S								T	T	T		S						G	G	G	T	T											T	T	S								T	T			G	G	G					.	.	.
Template Predicted Secondary structure											.	.	.																																																																		.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	R	A	S	H	M	F	L	S	P	D	K	N	G	Q	M	T	I	Y	Q	T	S	G	N	P	Y	G	H	I	I	M	R	G	G	K	K	.	P	N	Y	H	A	D	D	I	A	A	A	C	D	T	L	H	E	F	D	L	P	E	H	L	V	V	D	F	S	H	G	N	C	Q	K	Q	H	R	R	Q	L	E	V
Query Conservation																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	I	T	E	S	G	N	P	N	V	L	A	T	E	R	G	V	S	F	G	Y	N	T	L	V	S	D	M	R	.	A	L	P	I	M	A	G	L	.	.	G	A	P	V	I	F	D	A	T	H	S	V	Q	Q	P	G	Q	R	E	F	V	E	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T														S	S	S						T	T	.							T	T	.	.	T	S										T						G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.									.	.
Template SS confidence
																	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	D	I	C	Q	Q	I	R	N	G	S	T	A	I	A	G	I	M	A	E	S	F	L	R	E	G	T	Q	K	I	V	G	S	Q	P	L	T	Y	G	Q	S	I	T	D	P	C	L	G	W	E	D	T	E	R	L	V	E	K	L
Query Conservation
Alig confidence			.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	A	R	A	A	V	A	V	G	V	A	G	F	F	I	E	T	H	E	D	P	D	N	A	P	S	D	G	P	N	M	V	P	I	.	.	.	.	.	.	.	.	.	.	.	D	K	M	P	A	L	L	E	K	L
Template Known Secondary structure			.	.	.	.	.										S								S	S	G	G	G		S	S	S	G	G	G				G	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure			.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.												.	.	260	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions