Job Description P00887 Confidence 35.25% Date Thu Jan 5 10:56:58 GMT 2012 Rank 70 Aligned Residues 148 % Identity 15% Template c3daqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus Resolution 1.45 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	D	S	R	R	R	I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G
Query Conservation
Alig confidence																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	E	K	E	L	I	L	K	T	V	I	D	L	V	D	K	R	V	P	V	I	A	G	.	T	G	T	N	D	T	E	K	S	I	Q	A	S	I	Q	A	K	A	L	G	A	.	.	.	.	D	A	I	M	L	I	T	P	Y	Y	N	K	T	.	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S						.				S																T		.	.	.	.	S									S	S			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																						.	.	.	.														.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.		.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T	R	I
Query Conservation
Alig confidence		.	.	.	.													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.													.
Template Conservation		.	.	.	.													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.													.
Template Sequence		.	.	.	.	R	G	L	V	K	H	F	E	A	I	A	D	.	.	.	A	V	K	L	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	N	V	P	S	R	T	N	M	T	I	E	P	E	T	V	E	I	L	S	.	Q	H	P	Y	I	V	A	L	K	D	A	T	.	N	D	F	E	Y
Template Known Secondary structure		.	.	.	.													.	.	.				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.									S													.	T	S	T	T									.
Template Predicted Secondary structure		.	.	.	.													.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.													.
Template SS confidence
						115	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.															.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.
		195	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure														.								.	.	.	.	.	.	.	.
Query SS confidence														.								.	.	.	.	.	.	.	.
Query Sequence		A	V	D	A	I	R	A	A	R	A	S	H	.	M	F	L	S	P	D	K	.	.	.	.	.	.	.	.	N	G	Q	M	T	I	Y	Q	T	S	G	N
Query Conservation														.								.	.	.	.	.	.	.	.
Alig confidence														.								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	E	V	K	K	R	I	D	T	N	S	F	A	L	Y	S	G	N	D	D	N	V	V	E	Y	Y	Q	R	G	G	Q	G	V	I	S	V	I	A	N
Template Known Secondary structure							T	T	S		T	T	T	S					S		G	G	G							T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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