 |
Job Description | P00887 | Confidence | 40.27% | Date | Thu Jan 5 10:56:58 GMT 2012 |
Rank | 63 | Aligned Residues | 112 |
% Identity | 17% | Template | c2hjpA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:phosphonopyruvate hydrolase; |
PDBTitle: crystal structure of phosphonopyruvate hydrolase complex with2 phosphonopyruvate and mg++
|
Resolution | 1.90 Å |
|
 |
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
|
. | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | D | A | I | R | A | A | R | A | S | H | M | F | L | S | P | D | K | N | G | Q | M | T | I | Y | Q | T | S | G | N | P | Y | G | H | I | I | M | R | G | G | K | K | P | N | Y | H | A | D | D | I | A | A | A | C | D | T | L | H | E | . |
. |
F | D | L | P | E | H | L | V | V | D | F | S | H | G | N | C | Q | K |
Query Conservation |   |
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   | . | . |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |
|
|
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   | . | . | . |
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   | . |
Template Sequence |   |
P | L | V | A | K | L | A | E | Q | A | G | F | G | G | I | W | G | S | G | F | E | L | S | A | . |
. |
. |
S | Y | A | V | P | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | N | I | L | S | M | S | T | H | L | E | M | M | R | A | I | A | S | T | V | S | I | P | L | I | A | D | I | D | T | G | F | G | N | . |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|  |  |  |  |  |  | . | . | . |  | T | T | S |
| T | . | . | . | . | . | . | . | . | . | . | . | . | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|  |  |  |  |
| T | T | T | T | S | S | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  | . | . | . |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
  |
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | H | R | R | Q | L | E | V | C | E | D | I | C | Q | Q | I | R | N | G | S | T | A | I | A | G | I | M | A | E | S | F | L | R | E | G | T | Q | K | I | V | G | S | Q | P | L | T | Y | G | Q | S | I | T | D | P | C | L | G | W | E | D | T | E | R | L | V | E | K | L | A | S | A | V | D | T | R |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
| . | . | . |   |   |
|
|   |
|
|
|
|   |   |   |
|   |   | . | . | . | . | . |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
A | V | N | V | H | Y | V | V | P | Q | Y | E | A | A | G | . |
. |
. |
A | S | A | I | V | M | E | D | K | T | F | P | K | D | T | . |
. |
. |
. |
. |
Q | E | L | V | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | E | F | Q | G | K | I | A | A | A | T | A | A | R |
Template Known Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . |
| S |  |  |  |  |  |
| B |
| S | S |
|
|
| . | . | . | . | . |
|
| B |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 120 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|