Job Description P00887 Confidence 98.65% Date Thu Jan 5 10:56:58 GMT 2012 Rank 19 Aligned Residues 248 % Identity 15% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																		.	.																																													.															.	.	.
Query SS confidence																		.	.																																													.															.	.	.
Query Sequence		I	E	K	I	L	N	G	E	D	K	R	L	L	V	I	I	.	.	G	P	C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	V	M	R	T	Y	F	E	K	P	R	T	V	V	.	G	W	K	G	L	I	S	D	P	D	L	N	G	S	.	.	.
Query Conservation																		.	.																																													.															.	.	.
Alig confidence																		.	.																									.	.	.	.	.	.	.														.															.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		I	G	N	R	S	V	G	Y	N	H	E	P	L	I	I	C	E	I	G	I	N	H	E	G	S	L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	.	.	.	.	.	.	.	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E
Template Known Secondary structure			T	T					T	T	S										T	T	T	T	T																T		S	.	.	.	.	.	.	.															G	G	G	G	G				T	T		S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.																																									.
Query SS confidence		.	.																																									.
Query Sequence		.	.	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	I	A	D	L	.	I	S	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V	G	F	K	N	G	T	D	G	N	T
Query Conservation		.	.																																									.
Alig confidence		.	.																																									.																																	.
Template Conservation																																																																													.
Template Sequence		I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	.	M	N	S	I
Template Known Secondary structure																							T	T									S											T		S						G	G	G	T	T										T	T		S							T	.	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		R	I	A	V	D	A	I	R	A	A	R	A	S	H	M	F	L	S	P	D	K	N	G	Q	M	T	I	Y	Q	T	S	G	N	P	Y	G	H	I	I	M	R	G	G	K	K	.	P	N	Y	H	A	D	D	I	A	A	A	C	D	T	L	H	E	F	D	L	P	E	H	L	V	V	D	F	S	H	G	N	C	Q
Query Conservation																																															.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.										.																							.											.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																																	.											.
Template Sequence		E	S	I	K	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	I	R	E	A	G	V	P	.	.	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	.	I	I	G	L	S	D	H	T	L	D	.
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T			.	.										S	S								T	T										T	T	S	.								S	S	S	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																																	.											.
Template SS confidence
		161	.	.	.	.	.																			.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	H	R	R	Q	L	E	V	C	E	D	I	C	Q	Q	I	R	N	G	S	T	A	I	A	G	I	M	A	E	S	F	L	R	E	G	T	Q	K	I	V	G	S	Q	P	L	T	Y	G	Q	S	I	T	D	P	C	L	G	W	E	D	T	E	R	L	V	E	K	L	A	S	A	V	D	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.														.	.	.	.	.																	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.														.	.	.	.	.																	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	Y	A	C	L	G	A	V	A	L	G	G	S	.	.	.	.	.	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D	.	.	.	.	I	V	C	S	M	.	.	.	.	.	.	.	.	.	N	P	D	T	F	K	E	L	K	Q	G	A	H	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S										T			.	.	.	.	.						B		S		T	T			S	T	T	.	.	.	.	G	G	G		B	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.														.	.	.	.	.																	.	.	.	.						.	.	.	.	.	.	.	.	.
Template SS confidence
											219	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.										.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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