Job Description P00887 Confidence 76.33% Date Thu Jan 5 10:56:58 GMT 2012 Rank 30 Aligned Residues 98 % Identity 21% Template c1ortD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa Resolution 3.00 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																															.	.	.										.	.
Query SS confidence																															.	.	.										.	.
Query Sequence		C	S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	.	.	.	V	M	R	T	Y	F	E	K	P	.	.	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G	S	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E
Query Conservation																															.	.	.										.	.
Alig confidence																															.	.	.										.	.				.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	T	R	E	L	R	Y	L	L	D	L	S	R	D	L	K	R	A	K	Y	T	G	T	E	Q	Q	H	L	K	R	K	N	I	A	L	I	F	E	K	T	S	T	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	F	E	V	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Y	D
Template Known Secondary structure																								T					S		T	T								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.													.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																			.	.	.									.	.	.	.	.
Query SS confidence																			.	.	.									.	.	.	.	.
Query Sequence		L	G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	.	.	.	I	A	D	L	I	S	W	G	.	.	.	.	.	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V
Query Conservation																			.	.	.									.	.	.	.	.
Alig confidence																			.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		Q	G	A	N	V	T	Y	I	D	P	N	S	S	Q	I	G	H	K	E	S	M	K	D	T	A	R	V	L	G	R	M	Y	D	A	I	G	Y	R	G	F	K	Q	E	I	V	E	E	L	A	K	F	A	G	V	P	V
Template Known Secondary structure		T	T								S	T	T							T														S							S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions