Job Description P00887 Confidence 71.21% Date Thu Jan 5 10:56:58 GMT 2012 Rank 33 Aligned Residues 96 % Identity 24% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																														.	.	.										.	.
Query SS confidence																														.	.	.										.	.
Query Sequence		S	I	H	D	L	T	A	A	M	E	Y	A	T	R	L	Q	S	L	R	N	Q	Y	Q	S	R	L	E	I	.	.	.	V	M	R	T	Y	F	E	K	P	.	.	R	T	V	V	G	W	K	G	L	I	S	D	P	D	L	N	G	S	Y	R	V	N	H	G	L	E	L	A	R	K	L	L	L	Q	V	N	E	L
Query Conservation																														.	.	.										.	.
Alig confidence																														.	.	.										.	.				.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	E	D	I	E	T	V	L	A	T	A	E	R	L	E	R	E	L	K	E	K	G	Q	L	E	Y	A	K	G	K	I	L	A	T	L	F	F	E	P	S	T	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	F	E	S	.	.	.	.	.	.	.	.	.	.	.	.	A	M	H	R	L
Template Known Secondary structure																								S	S			T	T	T	T								S	S			S				.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.													.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																		.	.	.	.	.							.	.	.	.	.
Query SS confidence																		.	.	.	.	.							.	.	.	.	.
Query Sequence		G	V	P	T	A	T	E	F	L	D	M	V	T	G	Q	F	.	.	.	.	.	I	A	D	L	I	S	.	.	.	.	.	W	G	A	I	G	A	R	T	T	E	S	Q	I	H	R	E	M	A	S	A	L	S	C	P	V
Query Conservation																		.	.	.	.	.							.	.	.	.	.
Alig confidence				.														.	.	.	.	.							.	.	.	.	.
Template Conservation				.
Template Sequence		G	G	.	A	V	I	G	F	A	E	A	S	T	S	S	V	K	K	G	E	S	L	R	D	T	I	K	T	V	E	Q	Y	C	D	V	I	V	I	R	H	P	K	E	G	A	A	R	L	A	A	E	V	A	E	V	P	V
Template Known Secondary structure		T		.						S		G	G	G	S	G	G	G	G	T											T	T	T		S							S	S	T	T								T		S	S
Template Predicted Secondary structure				.
Template SS confidence
		70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions