|   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | V | E | S | A | K | S | L | R | D | D | T | W | V | T | L | R | G | N | I | V | E | R | I | S | D | D | . |
. |
. |
L | Y | V | F | K | D | A | S | G | T | I | N | V | D | I | D | H | K | . |
. |
. |
. |
R | W | N | G | V | T | V | T | P | K | D | T | V | E | I | Q | G | E | V | D | K | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |
| . | . | . |   |
|   |
|   |
|   |
|
|   |
|   |
|
|
|
|   |   | . | . | . | . |   |
|   |
|   |   |
|   |
|   |   |   |
|
|
|   |
|
|
|
|
| . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |
|
|   |
|
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
Y | A | G | S | L | R | E | T | H | V | G | E | E | V | V | L | E | G | W | V | N | R | R | R | D | L | G | G | L | I | F | L | D | L | R | D | R | E | G | L | V | Q | L | V | A | H | P | A | S | P | A | Y | A | T | A | E | R | . |
V | R | P | E | W | V | V | R | A | K | G | L | V | R | L | R | P | E | P | N | P | R |
Template Known Secondary structure |   |
| G | G | G |
|
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T | S | T | T |  |  |  |  | T | T | . |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S | S |
|
| T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
|
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
. |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
D | W | N | S | V | E | I | D | V | K | Q | I | R | K | V | N | P |
Query Conservation |   |
. |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |
|   |
|
|
|   |
Template Sequence |   |
L | A | T | G | R | V | E | V | E | L | S | A | L | E | V | L | A | E |
Template Known Secondary structure |   |
S | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |