Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADU5
Confidence96.64%DateThu Jan 5 11:21:52 GMT 2012
Rank12Aligned Residues73
% Identity16%Templated1e1oa1
SCOP infoOB-fold Nucleic acid-binding proteins Anticodon-binding domain
Resolution2.12

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.... .....80.........90...... ...100.........110....... ..120......
Predicted Secondary structure 




...







.......











.
Query SS confidence 
















. . .





















. . . . . . .




















.








Query Sequence  DTWVTLRGNIVERISDD. . . LYVFKDASGTINVDIDHKRWNG. . . . . . . VTVTPKDTVEIQGEVDKDWNS. VEIDVKQIR
Query Conservation 
  
 
 
 

     
... 
 
 
 

 
 



   
 
.......  
 
   


 




    .  


  
 
Alig confidence 
















...





















.......




















.








Template Conservation     
 
 


   
  


 
  


  
 


                  
  

 
 
 
 
  
 





      
Template Sequence  NIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELR
Template Known Secondary structure 

TTTTTTTSSTTTGGG

TT

TT

Template Predicted Secondary structure 























Template SS confidence 















































































   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   127..130
Predicted Secondary structure 

Query SS confidence 



Query Sequence  KVNP
Query Conservation   

 
Alig confidence 



Template Conservation 



Template Sequence  LLTK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   144...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions