 |
Job Description | P0ADU5 | Confidence | 32.20% | Date | Thu Jan 5 11:21:52 GMT 2012 |
Rank | 48 | Aligned Residues | 42 |
% Identity | 21% | Template | c3h43F_ |
PDB info |
PDB header:hydrolase | Chain: F: PDB Molecule:proteasome-activating nucleotidase; |
PDBTitle: n-terminal domain of the proteasome-activating nucleotidase2 of methanocaldococcus jannaschii
|
Resolution | 2.10 Å |
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | I | V | E | R | I | S | D | D | L | Y | V | F | K | D | A | S | G | . |
T | I | N | V | D | I | D | H | K | R | W | N | G | V | T | V | T | P | K | D | T | V | E | I |
Query Conservation |   |
|   |
|
|   |   |   |   |   |
|   |
|   |
|   |
|   |
|
| . |   |
|   |
|
|
|
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|   |
|
|   |   | . |   |
|
|
|
|   |   |
|
|
|
Template Sequence |   |
G | T | V | V | D | K | V | G | E | R | K | V | V | V | K | S | S | T | G | P | S | F | L | V | N | V | S | H | F | V | N | P | D | . |
D | L | A | P | G | K | R | V | C | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | B |
| T | T | S |
| G | G | . | G |
|
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
. | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|