Job Description P0ADU5 Confidence 92.49% Date Thu Jan 5 11:21:52 GMT 2012 Rank 28 Aligned Residues 77 % Identity 18% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.						.	.	.																																		.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.						.	.	.																																		.
Query Sequence		K	S	L	R	D	D	T	W	V	T	L	R	G	N	I	V	E	R	I	.	.	.	.	.	.	.	.	.	.	S	D	D	L	Y	.	.	.	V	F	K	D	A	S	G	T	I	N	V	D	I	D	H	K	R	W	N	G	V	T	V	T	P	K	D	T	V	E	I	Q	G	.	E	V	D	K	D	W	N	S	V
Query Conservation																					.	.	.	.	.	.	.	.	.	.						.	.	.																																		.
Alig confidence																					.	.	.	.	.	.	.	.	.	.						.	.	.																					.													.
Template Conservation																																																											.
Template Sequence		G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	N	L	T	D	I	.	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E	G	Y	Y	G	G	L
Template Known Secondary structure		G	G			S	S																					T	T	S													T	T									G	G	G	G	G	S	.				T	T													T	T	S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	D	V	K	Q	I	R	K	V	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	T	A	N	Y	V	E	I	L	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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