Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADU5
Confidence97.22%DateThu Jan 5 11:21:52 GMT 2012
Rank5Aligned Residues83
% Identity18%Templatec1b8aB_
PDB info PDB header:ligaseChain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70........ .80.........90....... ..100.........110........
Predicted Secondary structure 








...








......











Query SS confidence 






























. . .


















. . . . . .




















Query Sequence  TVESAKSLRDDTWVTLRGNIVERISDDLYVF. . . KDASGTINVDIDHKRWNGV. . . . . . TVTPKDTVEIQGEVDKDWNSV
Query Conservation 

  
    

  
 
 
 

     
 
 
... 
 

 
 



   
 
 ...... 
 
   


 




     
Alig confidence 






























...


















......




















Template Conservation     

     
  
 
 


   
  


 

 


  
 



                
  

 
 
 
 
       
Template Sequence  YSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVNFTPKAK
Template Known Secondary structure 
GGG

GGGTT

SSTTGGGS
GGG

TT

TTST
Template Predicted Secondary structure 





























Template SS confidence 















































































   1006...1010.........1020.........1030.........1040.........1050.........1060.........1070.........1080.....
 
   119120.........130
Predicted Secondary structure  ...

Query SS confidence  . . .











Query Sequence  . . . EIDVKQIRKVNP
Query Conservation  ... 


  
  

 
Alig confidence  ...











Template Conservation    


    
 


 
Template Sequence  LGFEILPEKIVVLNR
Template Known Secondary structure  TS
Template Predicted Secondary structure 

Template SS confidence 














   1086...1090.........1100
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions