Return to main results Retrieve Phyre Job Id

Job DescriptionP76356
Confidence100.00%DateThu Jan 5 12:22:18 GMT 2012
Rank7Aligned Residues123
% Identity38%Templated2gufa1
SCOP infoTransmembrane beta-barrels Porins Ligand-gated protein channel
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ETLVVTTNRSASNLWESPATIQVIDQQTLQNSTNASIADNLQDIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVT
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Template Sequence  DTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDITQLSS. . . . . IFIRGTNASHVLVLIDGVRLN
Template Known Secondary structure  T
STTTSS
GGG

S
T
SSSTTSTT


.....TTGGGTT

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   6...10.........20.........30.........40.........50......... 60.........70.........80
 
   119120.........130.........140.........150.........160.......
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Query Sequence  YQRAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIVNFITKKG
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Template Sequence  LAGVSG. SADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRD
Template Known Secondary structure 

STTG.GGGGGGS
GGG
SS


TT
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   87..90.. .......100.........110.........120.........130....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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