Job Description P76356 Confidence 100.00% Date Thu Jan 5 12:22:18 GMT 2012 Rank 8 Aligned Residues 128 % Identity 27% Template d1kmoa_ SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 2.00

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		40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.				.	.	.	.
Predicted Secondary structure								.	.	.	.																																																				.	.	.	.									.	.	.
Query SS confidence								.	.	.	.																																																				.	.	.	.									.	.	.
Query Sequence		T	L	V	V	T	T	.	.	.	.	N	R	S	A	S	N	L	W	E	S	P	A	T	I	Q	V	I	D	Q	Q	T	L	Q	N	S	T	N	A	S	I	A	D	N	L	Q	D	I	P	G	V	E	I	T	D	N	S	L	A	G	R	K	.	.	.	.	Q	I	R	I	R	G	E	A	.	.	.	S	S	R	V
Query Conservation								.	.	.	.																																																				.	.	.	.									.	.	.
Alig confidence								.	.	.	.																																																				.	.	.	.									.	.	.
Template Conservation
Template Sequence		A	L	T	V	V	G	D	W	L	G	D	A	R	E	N	D	V	F	E	H	A	G	A	R	D	V	I	R	R	E	D	F	A	K	T	G	A	T	T	M	R	E	V	L	N	R	I	P	G	V	S	A	P	E	N	N	G	T	G	S	H	D	L	A	M	N	F	G	I	R	G	L	N	P	R	L	A	S	R	S
Template Known Secondary structure									S	S	T	T								T		S	S							G	G	G	T	G	G	G	T			S						T	T	S	T	T						S	B	T	T	B		S	T	T	S						T	T	S			G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	L	I	D	G	Q	E	V	T	Y	Q	R	A	G	D	N	Y	G	V	G	L	L	I	D	E	S	A	L	E	R	V	E	V	V	K	G	P	Y	S	V	L	Y	G	S	Q	A	I	G	G	I	V	N	F	I	T	K	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	L	M	D	G	I	P	V	P	F	A	P	Y	G	Q	P	Q	L	S	L	A	P	V	S	L	G	N	M	D	A	I	D	V	V	R	G	G	G	A	V	R	Y	G	P	Q	S	V	G	G	V	V	N	F	V	T	R	A	I
Template Known Secondary structure						T	T				S	S	S	T	T	T					S	S					G	G	G									S	S		T	T	T	S		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions