Job Description P76356 Confidence 99.96% Date Thu Jan 5 12:22:18 GMT 2012 Rank 14 Aligned Residues 125 % Identity 35% Template d1fepa_ SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 2.40

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																				.																									.	.	.	.
Query SS confidence																																				.																									.	.	.	.
Query Sequence		E	T	L	V	V	T	T	N	R	S	A	S	N	L	W	E	S	P	A	T	I	Q	V	I	D	Q	Q	T	L	Q	N	S	T	N	.	A	S	I	A	D	N	L	Q	D	I	P	G	V	E	I	T	D	N	S	L	A	G	R	K	.	.	.	.	Q	I	R	I	R	G	E	A	S	S	R	V	L	I	L	I	D
Query Conservation																																				.																									.	.	.	.
Alig confidence															.	.	.	.																		.																									.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		D	T	I	V	V	T	A	A	E	Q	N	L	Q	.	.	.	.	A	P	G	V	S	T	I	T	A	D	E	I	R	K	N	P	V	A	R	D	V	S	K	I	I	R	T	X	P	G	V	N	L	T	G	N	S	T	S	G	Q	R	G	N	N	R	Q	I	D	I	R	G	X	G	P	E	N	T	L	I	L	I	D
Template Known Secondary structure													T	T	.	.	.	.	S	T	T												S			S	S		T					T	T	S	T	T						S		T	T		T	T	T	T							T	T	S		G	G	G						T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.
Query Sequence		G	Q	E	V	T	Y	Q	R	A	G	D	.	.	.	.	.	.	.	.	N	Y	G	V	G	L	L	I	D	E	S	A	L	E	R	V	E	V	V	K	G	P	Y	S	V	L	Y	G	S	Q	A	I	G	G	I	V	N	F	I	T	K	K	G
Query Conservation													.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	P	V	S	S	R	N	S	V	R	Q	G	W	R	G	E	R	D	T	R	G	D	T	S	W	V	P	P	E	X	I	E	R	I	E	V	L	R	G	P	A	A	A	R	Y	G	N	G	A	A	G	G	V	V	N	I	I	T	K	K	G
Template Known Secondary structure		T					G	G	G	G	S				T	T	S				S			S	T	T	S	S		G	G	G									T					T	T		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions