Job Description P76206 Confidence 2.68% Date Thu Jan 5 12:20:32 GMT 2012 Rank 58 Aligned Residues 150 % Identity 12% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	F	E	G	N	L	N	A	G	Y	L	A	Q	S	G	N	T	K	S	S	S	L	T	A	D	T	T	M	T	W	Y	G	H	T	T	A	W	S	L	W	G	N	A	S	N	T	S	S	N	D	E	R	S	S	E	K	Y	A	A	G	G	R	S	R	F	N	L	T	D	Y	D	Y	L	F	G	Q	A	S	W
Query Conservation
Alig confidence																																														.	.	.
Template Conservation																																														.	.	.
Template Sequence		S	G	V	N	L	Y	L	S	Y	V	D	P	D	Q	T	V	D	S	S	L	V	T	E	E	F	G	I	A	A	D	W	S	N	D	M	I	S	L	A	A	A	Y	T	T	.	.	.	D	A	G	G	I	V	D	N	D	I	A	F	V	G	A	A	Y	K	F	N	D	A	G	T	V	G	L	N	W	Y	D	N	G
Template Known Secondary structure		S	S										T	T	T	T	S		G	G	G	S													S	S										.	.	.	S	G	G	G		T	T													S	S	S											T
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	R	Y	N	G	Y	R	E	R	D	V	L	T	A	G	Y	G	R	Q	F	L	N	G	P	V	H	S	F	R	F	E	F	G	P	G	V	R	Y	D	K	Y	T	D	N	A	S	E	T	Q	P	L	G	Y	A	S	G	A	Y	A	W	Q	L	T	D	N	A	K	F	T	Q	G	V	S	V	F	G	A	E
Query Conservation
Alig confidence											.	.	.	.	.	.								.	.			.	.	.	.	.																			.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.								.	.			.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		L	S	T	A	G	D	Q	V	T	.	.	.	.	.	.	L	Y	G	N	Y	A	F	.	.	G	A	.	.	.	.	.	T	T	V	R	A	Y	V	S	D	I	D	R	A	G	A	D	T	A	.	.	.	.	.	.	Y	G	I	G	A	D	Y	Q	F	A	E	G	V	K	V	S	G	S	V	Q	S	G	F	A	N
Template Known Secondary structure		T	S	T	T		S				.	.	.	.	.	.								.	.	T	T	.	.	.	.	.												S	T	T					.	.	.	.	.	.											T	T											T	T
Template Predicted Secondary structure											.	.	.	.	.	.								.	.			.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.			.	.						.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	T	L	N	S	E	S	A	L	N	V	A	I
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		E	T	V	A	D	.	.	V	G	V	R	F	D	F
Template Known Secondary structure							.	.
Template Predicted Secondary structure							.	.
Template SS confidence
		278	.	280	.	.			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions