Return to main results Retrieve Phyre Job Id

Job DescriptionP76206
Confidence53.40%DateThu Jan 5 12:20:32 GMT 2012
Rank27Aligned Residues169
% Identity11%Templated1by5a_
SCOP infoTransmembrane beta-barrels Porins Ligand-gated protein channel
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SSSLTADTTMTWYGHTTAWSLWGNASNTSSNDE. . . . . . . . . . . . . . RSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRY
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Template Sequence  SKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKRPLSASVNVVGSYTYTDAEY
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Query Sequence  NGYRE. . . . . . . . . . RDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAYA. . WQLTD. . . . NAK
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Template Sequence  TTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSN
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Query Sequence  FTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTW
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Template Sequence  VALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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