Job Description P76206 Confidence 16.63% Date Thu Jan 5 12:20:32 GMT 2012 Rank 39 Aligned Residues 134 % Identity 18% Template d1af6a_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																									90	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	L	N	A	G	Y	L	A	Q	S	G	N	T	K	.	.	.	.	.	.	.	.	S	S	S	L	T	A	D	T	T	M	T	W	Y	G	H	T	T	A	W	S	L	W	G	N	A	S	N	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	E
Query Conservation																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	L	E	L	G	V	D	Y	G	R	A	N	L	R	D	N	Y	R	L	V	D	G	A	S	K	D	G	W	L	F	T	A	E	H	T	Q	S	V	L	K	G	F	N	K	F	V	V	Q	Y	A	T	D	S	M	T	S	Q	G	K	G	L	S	Q	G	S	G	V	A	F	D	N	E	K	F	A	Y	N	I	N
Template Known Secondary structure																	T	T		B			T	T																	T	T												G	G	G	T	T	T		S	S					S						T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	S	S	E	K	Y	A	A	G	G	R	S	R	F	N	L	T	D	Y	D	Y	L	F	G	Q	A	S	W	L	T	D	R	Y	N	G	Y	R	E	R	D	V	L	T	A	G	Y	G	R	Q	F	L	N	G	P	V	H	S	F	R	F	E	F	G	P	G	V	R	Y	D	K	Y	T	D	N	A	S	E	T	Q	.
Query Conservation																																																																																	.
Alig confidence																																																																		.	.														.
Template Conservation																																																																		.	.
Template Sequence		N	N	G	H	M	L	R	I	L	D	H	G	A	I	S	M	G	D	N	W	D	M	M	Y	V	G	M	Y	Q	D	I	N	W	D	N	D	N	G	T	K	W	W	T	V	G	I	R	P	M	Y	K	W	T	P	I	M	S	T	V	M	E	I	G	Y	.	.	D	N	V	E	S	Q	R	T	G	D	K	N	N	Q
Template Known Secondary structure																		T	T	T															T	T	S																S	S	S	S										.	.						T	T	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.
																				172	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	G	Y	A	S	G	A	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	I	T	L	A	Q	Q	W	Q	A	G	D	S	I	W	S	R	P	A	I	R	V	F	A	T	Y
Template Known Secondary structure												S	S	S	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions