Return to main results Retrieve Phyre Job Id

Job DescriptionP76206
Confidence92.43%DateThu Jan 5 12:20:32 GMT 2012
Rank16Aligned Residues140
% Identity14%Templatec3dwoX_
PDB info PDB header:membrane proteinChain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
Predicted Secondary structure 















Query SS confidence 















































































Query Sequence  PFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGHTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWL
Query Conservation   
 
    
     


          
       
        
       
                          
Alig confidence 











....































































Template Conservation 
     
     ....     
        

                            

 

     
 

 
  
 
Template Sequence  PAYASLDWVHQF. . . . NDRLSLGASATWTEWSSFQDLTLKSHGNTIVSIPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYD
Template Known Secondary structure 


....SSS
GGG

TT




SSSS
Template Predicted Secondary structure 


....























Template SS confidence 















































































   285....290...... ...300.........310.........320.........330.........340.........350.........360
 
   122...... .130.........140.........150.........160......... 170.........180.
Predicted Secondary structure 

........








............
Query SS confidence 






. . . . . . . .








































. . . . . . . . . . . .











Query Sequence  TDRYNGY. . . . . . . . RERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASE. . . . . . . . . . . . TQPLGYASGAYA
Query Conservation   
 
   ........  
   
 
 

         
    
  
  
        ............            
Alig confidence 






........








































............











Template Conservation               
       
 
                
                                   
   
Template Sequence  QTPTHNATRDPRIPDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLKTVNQDRLGGGRLDGRATSKGQVFSLSAT
Template Known Secondary structure 

S

TTT

SSS




SSSSS



B

GGGTS
Template Predicted Secondary structure 































Template SS confidence 















































































   361........370.........380.........390.........400.........410.........420.........430.........440
 
   182...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  WQLT
Query Conservation      
Alig confidence 



Template Conservation 
 
 
Template Sequence  YDFH
Template Known Secondary structure 


Template Predicted Secondary structure 
Template SS confidence 



   441...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions