Job Description P76206 Confidence 7.59% Date Thu Jan 5 12:20:32 GMT 2012 Rank 41 Aligned Residues 209 % Identity 14% Template c3bryB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux Resolution 3.20 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.												.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		D	S	V	F	T	V	M	D	D	P	A	S	A	K	K	P	F	E	G	N	L	N	A	G	Y	L	A	Q	S	.	.	.	.	.	.	.	.	.	.	.	G	N	T	K	S	S	S	L	T	A	D	T	T	M	T	W	Y	G	H	T	T	A	W	S	L	W	G	N	A	S	N	T	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	M	M	E	N	P	A	T	L	G	L	M	G	E	G	R	H	F	S	L	G	L	D	V	V	S	T	D	I	K	V	T	T	A	S	S	G	N	H	G	N	N	N	G	P	Y	F	A	P	Q	T	A	F	V	Y	R	Q	G	R	Y	A	F	G	A	G	I	F	A	E	G	G	L	G	T	Q	Y	G	G	S
Template Known Secondary structure		G	G	G	G	S		G	G	G	T	T	S	S		S																				B			T	T		S	S	S	S															T	T																			S	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
														88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	S	N	D	E	R	S	S	E	K	Y	A	A	G	G	R	S	R	F	N	L	T	D	Y	D	Y	L	F	G	Q	A	S	W	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	L	S	R	T	S	N	G	V	D	T	G	L	D	Q	F	S	R	L	L	V	L	R	V	P	F	S	A	A	Y	H	V	T	D	K	L	T	V	G	A	S	V	D	A	V	W	T	S	L	N	L	G	T	L	L	D	V	S	Q	I	G	T	L	A	G	Q	G	R	V	S	G	T	L	V	P	T	L	L	G
Template Known Secondary structure		S	B	T	T	B		S	S	S				S	S																			S	S	S	S																						S		S	S	S	S	T	T	T	S	S	S				T	T	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
											123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																					.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	R	Y	N	G	Y	R	E	R	D	V	L	T	A	G	Y	G	R	Q	F	L	N	G	P	V	H	S	F	R	F	E	F	G	P	G	V	R	Y	D	K	Y	T	D	N	A	S	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	L
Query Conservation		.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		V	P	G	L	S	G	G	Y	I	D	F	S	G	V	Q	A	W	G	I	G	G	R	L	G	L	T	Y	Q	V	T	P	D	.	.	.	.	.	.	T	R	I	G	A	A	Y	Q	A	K	T	H	V	G	D	L	T	G	Q	A	T	L	S	A	V	G	N	I	P	L	K	G	D	V	T	V	R	N	F	Q	M	P
Template Known Secondary structure		S	S			S																										T	T	.	.	.	.	.	.											B	B											B																		B
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																												.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	A	S	G	A	Y	A	W	Q	L	T	D	N	A	K	F	T	Q	G	V	S	V	F	G	A	E	D	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	E	S	A	L	N	V	A	I	N	E	H	F	G	L	K	V	A	Y	N	V
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	L	T	V	G	I	S	H	Q	F	N	D	Q	L	S	V	S	A	D	Y	Q	R	V	F	W	S	S	V	M	K	D	M	N	V	G	F	V	Q	S	G	S	A	A	N	L	D	L	S	L	P	Q	N	Y	R	D	I	S	V	F	G	I	G	A	E	Y	R	Y	N	A	K	W	T	F	R	G	G	F	H	Y
Template Known Secondary structure												S	S	S	S												G	G	G			S									S	S	S																												T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	N	S	E	P	P	E	S	A	P	E	H	T	D	R	R	T	T	L	S	L	G	Y	S	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	Q	E	T	T	S	L	T	G	G	V	S	Y	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.															S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													359	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions