Job Description P76206 Confidence 30.40% Date Thu Jan 5 12:20:32 GMT 2012 Rank 35 Aligned Residues 199 % Identity 10% Template c2qdzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:tpsb transporter fhac; PDBTitle: structure of the membrane protein fhac: a member of the2 omp85/tpsb transporter family Resolution 3.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		A	K	K	P	F	E	G	N	L	N	A	G	Y	L	A	Q	S	G	N	T	K	S	S	S	L	T	A	D	T	T	M	T	W	Y	G	.	.	.	H	T	T	A	W	S	L	W	G	N	A	S	N	T	S	S	N	D	E	R	S	S	E	K	Y	A	A	G	G	R	S	R	F	N	L	T	D	Y	D	Y	L	F
Query Conservation																																					.	.	.
Alig confidence																		.																			.	.	.
Template Conservation																		.
Template Sequence		R	R	A	L	P	R	V	S	L	G	M	D	N	S	G	P	.	G	T	P	E	N	G	R	Y	K	Y	N	A	S	V	T	A	N	D	L	L	G	L	N	D	T	L	G	L	Y	I	G	N	R	Y	Y	R	D	A	G	H	D	A	E	R	N	Y	D	L	M	Y	S	V	P	L	G	R	T	R	L	D	L	Q	T
Template Known Secondary structure					S											S		.	S	S	S		S	S													S	S	S	S	S													S			S	S															T	T
Template Predicted Secondary structure																		.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																																													.	.
Query SS confidence														.	.	.	.	.	.																																																													.	.
Query Sequence		G	Q	A	S	W	L	T	D	R	Y	N	G	.	.	.	.	.	.	Y	R	E	R	D	V	L	T	A	G	Y	G	R	Q	F	L	N	G	P	V	H	S	F	R	F	E	F	G	P	G	V	R	Y	D	K	Y	T	D	N	A	S	E	T	Q	P	L	G	Y	A	S	G	A	Y	A	W	Q	L	T	D	N	.	.
Query Conservation														.	.	.	.	.	.																																																													.	.
Alig confidence														.	.	.	.	.	.																																																													.	.
Template Conservation
Template Sequence		G	Y	S	T	Y	R	N	L	L	K	T	R	Y	G	Q	Y	Q	S	A	G	N	S	R	S	F	G	L	K	A	T	R	L	L	Y	R	D	T	R	S	Q	F	S	V	Y	G	G	L	K	L	R	Q	N	K	N	Y	L	A	G	T	R	L	D	V	S	S	K	H	Y	S	D	V	T	V	G	M	Q	Y	S	T	Q
Template Known Secondary structure											S	S	S	S																								S	S																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
									188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																												.	.	.
Query SS confidence		.	.	.	.	.	.	.																												.	.	.
Query Sequence		.	.	.	.	.	.	.	A	K	F	T	Q	G	V	S	V	F	G	A	E	D	T	T	L	N	S	E	S	A	L	N	V	A	I	.	.	.	N	E	H	F	G	L	K	V	A	Y	N	V	T	W	N	S	E	P	P	E	S	A	P	E	H
Query Conservation		.	.	.	.	.	.	.																												.	.	.
Alig confidence		.	.	.	.	.	.	.																												.	.	.																		.
Template Conservation																																																								.
Template Sequence		R	G	A	N	A	Y	F	G	D	L	S	F	T	R	G	V	G	V	G	N	V	S	R	F	N	G	S	L	A	W	T	R	Y	M	A	L	A	G	Q	P	I	Q	W	A	S	Q	L	G	F	Q	Y	S	R	Q	.	Q	L	L	N	S	Y	Q
Template Known Secondary structure			S	S																																		T	T															S	S	.		S	S	S	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions