Job Description P76206 Confidence 97.88% Date Thu Jan 5 12:20:32 GMT 2012 Rank 1 Aligned Residues 177 % Identity 16% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																					.																.	.	.	.	.	.
Query SS confidence																																					.																.	.	.	.	.	.
Query Sequence		H	T	T	A	W	S	L	W	G	N	A	S	N	T	S	S	N	D	E	R	S	S	E	K	Y	A	A	G	G	R	S	R	F	N	L	.	T	D	Y	D	Y	L	F	G	Q	A	S	W	L	T	D	.	.	.	.	.	.	R	Y	N	G	Y	R	E	R	D	V	L	T	A	G	Y	G	R	Q	F	L	N	G	P
Query Conservation																																					.																.	.	.	.	.	.
Alig confidence																																					.																.	.	.	.	.	.										.	.
Template Conservation																																																																				.	.
Template Sequence		N	D	W	H	F	N	I	G	A	M	Y	E	I	E	N	V	E	G	Y	G	E	D	M	D	G	L	A	E	P	S	V	Y	F	N	A	A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	.	.	E	L	E	V	H	Y	Q	F	L	E	N	D
Template Known Secondary structure																		S	S	S	B	T	T	B	T														T	T															T	T	T	T				S						.	.												S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.										200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																												.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		V	H	S	F	R	F	E	F	G	P	G	V	R	Y	D	K	Y	T	D	N	A	S	E	T	Q	P	.	.	.	L	G	Y	A	S	G	A	Y	A	W	Q	L	T	D	N	A	K	F	T	Q	G	V	S	V	F	G	A	.	.	.	.	.	.	.	.	.	E	D	T	T	L	N	S	E	S	A	L	N	V	A	I
Query Conservation																												.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F
Template Known Secondary structure		S																	S	S		T	T																				S	S	S														S									S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	H	F	G	L	K	V	A	Y	N	V	T	W	N	S	E	P	P	E	S	A	P	E	H	T	D	R	R	T	T	L	S	L	G	Y	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L
Template Known Secondary structure		S	S	S	B														S	S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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