Job Description P76206 Confidence 4.16% Date Thu Jan 5 12:20:32 GMT 2012 Rank 48 Aligned Residues 119 % Identity 12% Template c2ervA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein paer03002360; PDBTitle: crystal structure of the outer membrane enzyme pagl Resolution 2.00 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.															.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.															.	.	.	.	.	.	.	.	.
Query Sequence		R	E	R	D	V	L	T	A	G	Y	G	R	Q	F	L	N	G	P	V	H	S	F	R	F	E	F	G	P	G	V	R	Y	D	K	Y	T	D	N	A	S	E	T	Q	P	L	G	Y	A	S	G	A	Y	A	W	Q	L	.	T	D	N	A	K	F	T	Q	G	V	S	V	F	G	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.															.	.	.	.	.	.	.	.	.
Alig confidence																																					.																					.															.	.	.	.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		T	Y	R	L	G	L	S	W	D	W	D	K	S	W	W	Q	T	S	T	G	R	L	T	G	Y	W	D	A	G	Y	T	Y	W	E	G	.	G	D	E	G	A	G	K	H	S	L	S	F	A	P	V	F	V	Y	E	F	A	G	D	S	I	K	P	F	I	E	A	G	I	G	V	A	A	F	S	G	T	R	V	G
Template Known Secondary structure																			T	T																	.		S	S		S	S																	S	S															S	S	S			T
Template Predicted Secondary structure																																					.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
						199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	A	E	D	T	T	L	N	S	E	S	A	L	N	V	A	I	N	E	H	F	G	L	K	V	A	Y	N	V	T	W	N	S	E	P	P	E	S	A	P	E	H	T	D	R	R	T	T	L	S	L	G	Y	S	M
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																							.	.										.	.
Template Conservation																												.	.										.	.
Template Sequence		D	Q	N	L	G	S	S	L	N	F	E	D	R	I	G	A	G	L	K	F	A	N	G	Q	S	V	.	.	G	V	R	A	I	H	Y	S	N	.	.	A	G	L	K	Q	P	N	D	G	I	E	S	Y	S	L	F	Y	K	I
Template Known Secondary structure		T				S		S														T	T	S				.	.										.	.	T	T	S	S	T	T
Template Predicted Secondary structure																												.	.										.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions