Return to main results Retrieve Phyre Job Id

Job DescriptionP56976
Confidence0.92%DateThu Jan 5 12:06:26 GMT 2012
Rank98Aligned Residues8
% Identity50%Templatec1p6vC_
PDB info PDB header:rna binding protein/rnaChain: C: PDB Molecule:ssra-binding protein; PDBTitle: crystal structure of the trna domain of transfer-messenger2 rna in complex with smpb
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10..
Predicted Secondary structure 
Query SS confidence 







Query Sequence  IELTGWIV
Query Conservation 







Alig confidence 







Template Conservation 


 
 

Template Sequence  IVLKGSEV
Template Known Secondary structure  B


Template Predicted Secondary structure 
Template SS confidence 







   2930......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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