Return to main results Retrieve Phyre Job Id

Job DescriptionP69829
Confidence100.00%DateThu Jan 5 12:12:11 GMT 2012
Rank5Aligned Residues145
% Identity21%Templatec3oxpA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase enzyme ii, a component; PDBTitle: structure of phosphotransferase enzyme ii, a component from yersinia2 pestis co92 at 1.2 a resolution
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60... ......70.........80......
Predicted Secondary structure 
















..








Query SS confidence 






















































. .






















Query Sequence  QLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKMGST. . GIGNGIAIPHGKLEEDTLRAVGV
Query Conservation   
  

  
 
       
  
 
  
   
     
        
  

    
.. 

  




             
Alig confidence 









































.











..






















Template Conservation   
   
    
          
 
  
   
     
     .  
  

    
   

  




      
 
  
 
Template Sequence  XLKTLLTSDVIQVVSQAKDWRDAIAISCQPLIDNGAVEARYV. EAIYRSHEAIGPYYVVGPGIAXPHARPEDGVNRLSLA
Template Known Secondary structure 

GGGS

SSTTSB
T.

TTTT




GGGTB
S
Template Predicted Secondary structure 














.















Template SS confidence 















































































   1........10.........20.........30.........40.. .......50.........60.........70.........
 
   87..90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 


















Query SS confidence 





































































Query Sequence  FVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDT
Query Conservation     

 

     
   
  
  
          
 

  
   
 
      
       
    
   
Alig confidence 




























..






































Template Conservation 
  
  

         
  
  
     ..   
  
  
   
        
       
    
   
Template Sequence  LTVITEGVTFNAEGNDPVKLLIVLAATDS. . NSHIEAISQLAQLFDTASDVQALLNAKTPQDILSVIARY
Template Known Secondary structure 

S
GGG
S
SS..T
T

STT
Template Predicted Secondary structure 












..






Template SS confidence 





































































   80.........90.........100........ .110.........120.........130.........140.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions