Job Description P07813 Confidence 92.96% Date Thu Jan 5 11:00:33 GMT 2012 Rank 95 Aligned Residues 166 % Identity 12% Template c3sz3A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from vibrio cholerae2 with an endogenous tryptophan Resolution 1.50 Å

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		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.				.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		W	L	P	V	D	I	Y	I	G	G	I	E	H	A	I	M	H	L	L	Y	F	R	F	F	H	K	L	M	R	D	A	G	M	V	N	S	D	E	P	A	K	Q	L	L	C	Q	G	M	.	.	.	V	L	A	D	A	F	Y	Y	V	G	E	N	G	E	R	N	W	V	S	P	V	D	A	I	V	E	R	D	E
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	G	A	H	Q	V	P	V	G	S	D	Q	K	Q	H	L	E	L	A	R	D	I	A	T	R	F	N	N	I	Y	S	P	E	Q	P	I	F	T	I	P	E	P	Y	I	P	T	V	N	A	R	V	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T		S						G	G	G																				S	S	S		S	S									S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.				.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.			.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure																												.	.	.																																	.	.
Query SS confidence																												.	.	.																																	.	.
Query Sequence		K	G	R	I	V	K	A	K	D	A	A	G	H	E	L	V	Y	T	G	M	S	K	M	S	K	S	.	.	.	K	N	N	G	I	D	P	Q	V	M	V	E	R	Y	G	A	D	T	V	R	L	F	M	M	F	A	S	P	A	D	M	T	.	.	L	E	W	Q	E	S	G	V	E	G	A	N	R	F	L	K	R
Query Conservation																												.	.	.																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.													.	.	.	.																	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	D	A	T	K	K	M	S	K	S	D	D	N	R	K	N	V	I	T	L	L	E	D	P	K	.	.	.	.	S	I	I	K	K	I	N	K	A	Q	T	D	A	E	T	P	P	R	I	A	Y	D	V	E	N	K	A	G	I	A	N	L	M	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T		S		G	G	G			B	T	T					.	.	.	.								T							S	S							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
																	192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	K	L	V	Y	E	H	T	A	K	G	D	V	A	A	L	N	V	D	A	L	T	E	N	Q	K	A	L	R	R	D	V	H	K	T	I	A	K	V	T	D	D	I	G	R	R	Q	T	F	N	T	A	I	A	A	I	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	A	A	T	G	K	T	F	A	E	I	E	A	Q	Y	A	G	V	E	M	Y	G	P	F	K	K	D	V	G	E	A	V	V	A	M	L	E	P	V	Q	A	E	Y	Q	R	I	R	N	D	R	E	Y	L	N	S	V	M	R
Template Known Secondary structure																	T	T	T				S																											T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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