Job Description P07813 Confidence 99.98% Date Thu Jan 5 11:00:33 GMT 2012 Rank 32 Aligned Residues 207 % Identity 22% Template c3pz6F_ PDB info PDB header:ligase Chain: F: PDB Molecule:leucyl-trna synthetase; PDBTitle: the crystal structure of glleurs-cp1 Resolution 2.60 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	P	Q	W	F	I	K	I	T	A	Y	A	D	E	L	L	N	D	L	D	K	L	D	H	W	P	D	T	V	K	T	M	Q	R	N	W	I	G	R	S	E	G	V	E	I	T	F	N	V	N	D	Y	D	N	T	L	T	V	Y	T	T	R	P	D	T	F	M	G	C	T	Y	L	A	V	A	A	G	H	P
Query Conservation
Alig confidence																		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	I	G	I	K	L	E	L	I	N	Y	T	T	L	L	.	.	.	.	.	.	F	Y	S	N	P	K	N	K	A	I	F	D	Q	L	W	E	N	Q	V	D	N	A	K	V	.	.	.	.	.	.	.	.	.	Y	L	L	A	A	T	L	R	P	E	T	M	V	G	Q	T	N	C	W	V	L	P	T	G	R
Template Known Secondary structure													S	S	T	T		.	.	.	.	.	.																	T	T			S				.	.	.	.	.	.	.	.	.							S		G	G	G	G	G	G								T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	A	Q	K	A	A	E	N	N	P	E	L	A	A	F	I	D	E	C	R	N	T	K	V	A	E	A	E	M	A	T	M	E	K	K	G	V	D	T	G	F	K	A	V	H	P	L	T	G	.	E	E	I	P	V	W	A	A	N	F	V	L	M	E	Y	G	T	G	A	V	M	A	V	P	G	H	D	Q	R	D
Query Conservation																																																			.
Alig confidence																										.																									.
Template Conservation																										.
Template Sequence		Y	G	A	Y	Y	I	N	K	D	E	V	I	I	V	S	E	H	A	A	V	N	M	A	H	.	E	L	D	F	I	S	E	I	S	G	S	D	L	L	L	A	T	V	R	A	P	L	S	P	Y	E	Q	I	F	V	L	P	L	E	T	I	K	M	D	K	G	T	G	I	V	T	S	V	P	S	D	A	P	D	D
Template Known Secondary structure									T	T														T		.														T	T						T	T		S		S								T	T			T	T	S	T	T	S						T	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		346												.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.																													.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	E	F	A	S	K	Y	G	L	N	I	K	P	V	I	L	A	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	E	P	D	L	S	Q	Q	A	L	T	E	.	.	K	G	V	L	F	N	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		Y	A	C	Y	K	D	I	L	E	N	R	N	G	I	A	E	K	Y	G	V	D	V	G	L	M	L	E	P	Y	S	P	L	P	I	I	E	I	P	D	I	G	T	L	S	A	V	R	L	C	E	E	S	N	V	S	S	D	R	A	K	L	T	Q	I	K	E	I	C	Y	T	K	G	F	Y	T	G	I	M	K	M
Template Known Secondary structure											T	G	G	G						T							T	T	T	S								B	T	T	T	B	S	S									T	T						S																					S
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	F	N	G	L	D	H	E	A	A	F	N	A	I	A	D	K	L	T	A	M	G	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	F	A	G	Q	S	V	K	D	C	K	Q	S	C	R	D	L	L	V	Q	N	N	Q	C
Template Known Secondary structure		S	T	T	T	T	S	B															T	T
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions