Job Description P07813 Confidence 94.07% Date Thu Jan 5 11:00:33 GMT 2012 Rank 88 Aligned Residues 160 % Identity 17% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	I	Y	I	G	G	I	E	H	A	I	M	H	L	L	Y	F	R	F	F	H	K	L	M	R	D	A	G	M	V	N	S	D	E	P	A	K	Q	L	L	C	Q	G	M	V	L	A	D	A	F	Y	Y	V	G	E	N	G	E	R	N	W	V	S	P	V	D	A	I	V	E	R	D	E	K	G	R	I	V	K
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	I	C	Q	L	G	L	D	Q	R	K	V	N	M	L	A	R	E	Y	C	D	L	I	.	.	.	.	.	.	.	.	G	R	K	L	K	P	V	I	L	S	H	H	M	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S					B	G	G	G															.	.	.	.	.	.	.	.	T										B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.		.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.		.	670	.	.	.	.	.	.	.	.	.	680	.
Predicted Secondary structure																						.																																														.
Query SS confidence																						.																																														.
Query Sequence		A	K	D	A	A	G	H	E	L	V	Y	T	G	M	S	K	M	S	K	S	.	K	N	N	G	I	D	P	Q	V	M	V	E	R	Y	G	A	D	T	V	R	L	F	M	M	F	A	S	P	A	D	M	T	L	E	W	Q	E	S	G	V	E	G	A	N	R	.	F	L	K	R	V	W	K	L	V	Y	E	H	T
Query Conservation																						.																																														.
Alig confidence		.	.	.	.	.	.	.	.	.												.																																														.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	K	Q	G	Q	A	K	M	S	K	S	D	P	D	S	A	I	F	M	E	D	T	E	E	D	V	A	R	K	I	R	Q	A	Y	C	P	R	V	K	Q	S	A	S	A	I	T	D	D	G	A	P	V	A	T	D	D	R	N	P	V	L	D	Y	F	Q	C	V	V	Y	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	S	T	T		S	S			S	S		G	G	G	S		B	T	T												T					S	S									S	S							T	T												T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.																	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	G	D	V	A	A	L	N	V	D	A	L	T	E	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	R	R	D	V	H	K	T	I	A	K	V	T	D	D	I	G	R	R	Q	T	F	N	T	A	I	A	A	I	M	E	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	A	A	A	T	I	D	G	T	T	Y	A	T	Y	E	D	L	E	Q	A	F	V	S	D	E	V	S	E	D	A	L	K	S	C	L	I	D	E	V	N	A	L	L	E	P	V	R	Q	H	F	A	S	N	E	E	A	H	E	L	L	E	A	V	K	S	Y
Template Known Secondary structure		T	T					S	S	S				S	S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions